| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0436 |
|---|
| Symbol | |
|---|
| ID | 4204528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 523441 |
|---|
| End bp | 523812 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642564993 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_697765 |
|---|
| Protein GI | 110802707 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1725] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATATAG TAGTTTCAAA CACTTCAGGG GTACCCATAT ATGAACAAAT AGCTAAAGCT
ATAAAAAATG AGATTTTATC TGGAGATTTA AAGGAAAATT CAGCATTGCC GTCAATAAGA
AGCTTAGCTT CTGAGCTTAG AGTAAGTGTA ATCACAACCA AGAGAGCTTA TGAAGAACTT
GAAAGAGATG GTTTTATATA CACTTTACCT GGTAAGGGAT CTTATGTGGC AGAGCAAAAT
AAAGAACTTT TAATGGAAGA AAAGCTTAGA GAAATAGAAG AAAAATTAGG AGAAGCAATT
GATATTGCAA ATAGCATAGG ACTAAATTTT AATGATTTAG TTGGAATGCT TAAAACTTTA
AAGGAATTAT AA
|
|---|
| Protein sequence | MNIVVSNTSG VPIYEQIAKA IKNEILSGDL KENSALPSIR SLASELRVSV ITTKRAYEEL
ERDGFIYTLP GKGSYVAEQN KELLMEEKLR EIEEKLGEAI DIANSIGLNF NDLVGMLKTL
KEL
|
|---|
| |