| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0421 |
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| Symbol | |
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| ID | 4206581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 507618 |
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| End bp | 510230 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642564978 |
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| Product | helicase/exonuclease |
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| Protein accession | YP_697750 |
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| Protein GI | 110801811 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAATT TAAATGAAGA GCAACAGAAG GTTGTGAATG AACAAAAAAA TAATATTATT
TTGCTTGCCT CTGCTGGAAC AGGAAAAACT AATACCTTAG CAAAGAGAGT AACTTCTATA
ATAAAAAATG GAAATTCAAA GCCTTCAGAA ATTTTATGTA TCACTTTTAC TAATAAGGCA
TGTAAAGAGA TGAGTGATAG GGTAATGAAA ATAGTTGGGG GAGAGGCTAA GGATATAACC
ATAAGAACTT TTCATAGTTT TTGCTTTGAT GTAGTTAGAA CTTATGCAAA GAGAAATACA
GATATTTTTT CAGATTTCAC AATATTTGAT GAAGATGATT GTAGGGAAGT TATAAGTAAA
TTAAGTTATT ACTATGCTAC AAGCAATTTA ATGGCTACTA ATATGCAAAT TCAAAGGGTT
ATTGATTTTA TAAAGGTTGA AAGAGCAAGA ATAGAAACTT TAGAGGATAG AGTTTTAGAT
GAATATAAAA CTGTAATTGA TGAAATTTTT AAATTTAGAG AAGAAAAAAT AAATGGAGTT
TGTACTAACA AAGGAAACTT AAATTTAAAC CTTAAAAATT ATATTAAATT TCATGGTCAT
GAATTAGTAA CACTATATGA TTCTAAGCTT AGAGAGGACC ATGCTTTAGA CTTTAATGAT
TTGATAATAC TTACTAAGGA ATTATTTAAG GATGAAAAAG TTGTTAGAGC CCTTAAAAAT
AAATTTAAGT ATATAAATAT AGATGAGGTT CAGGATACAA GCATTATAGA GTATTCAATA
ATTGAGAAGC TTTTTGAGGG AAACAATGTT CTTATATGTG GAGATTTCTT TCAAACCATA
TATAGTTGGC GTGGATCTGA TCCAGAGATG ATTTTTAATA AATTTAAAGA GAAATATAAT
CCTGTAGAAA TTGTTTTTTC TAAGAATTAT AGGGCTACCC AAAATTTAAA TAAGGCTTCC
TTAGAATTTT TGAACAATGC TTTTTCTAGT AAAGTTTCTA CTATGTATAA AGATGGTATT
TTAGCAGAAT CAAAAGAAAA AGGTGAGAAA ATATTATTAA AGGAAACTAG AGGTGGAAGA
GAAGAGGCTA GGTTTATCTT TGATTATGCA AACAAGCTAT GTGAAAAGGG TGAAGATTTA
AAAAGAGTAT GTGTTCTTAC AAGGGATAAT AACTATAATA TAGGACTTAG TGAAGAGCTT
TATCAAATCG GTGGATATGA GGGAGCAGAT TTTGAGTTTA TACTTGTAGA TCAATTTAAG
TTTTTTAGGA GACAAGAAGT TAAAGATATA TTAGCCTTTT TAAAATTAAT AGCTAATAGA
TATGATTCTC TAAGTTTAAA GAGAATAGTT AATAGACTTC CAACAGGAAT TGGTATGAGA
ACATTAGAGG CTATAGAATC TTATAAGTAC AAAGAGGTTG GTATAAGATT AGCAGATTAT
ATAGATCCTC TTGTATTAGA ATATGGAGAA AAATTTTCCC TACTAATAAA TGAGTTTGAA
AAAGAGAATA TAATAGTTTT TGATGTGGAA AGTACAGGGG TTGATGTTAC AGAGGATGAG
ATAATTCAAA TAGCAGCAAT AAAATTAAAT AAAAATGTAG AAGTAGTAGA TAAGTTTGAA
AAATTTTTAA AGAATAAGAA ATCAGTTAAG GATTCTTATT ATGTTCATGG TTTTTCAGAT
GAAATGCTTC AAAGAATTGG AGAGGAGAAA GAAAAAGTTT TAAAGGAATT TGTGGAGTAT
TCTAAGGACT CTATAATAGT AGGTCACAAT GTTCAATATG ATATAAATAT CCTGTGTAGT
GAGCTTGAAA GAAATAATTT AGGAAAGCCT AAGTTTAAAA CTTTTTATGA TACTTTAGAT
ATATATAGAA GATTTTATCC TGGCAATATA AATTATAAGC TAGAAAACCT AAGTAAGGTT
TATGATACTA AACATAAGCC AAGCCATGAT GCTATGGATG ATATTATTGC TACAGGTGAG
CTTCTAGTTA GGGCAATAAA TGAAAAGATA AAGGAAACTT CAATGGAAAG AATGGCTTTA
ATGTCAAAAC ATTTAAAAGC ATTTACGGCT ATTAGTAAAA AGTTAAATGA GCTTTTTCAA
ATAGCAGAAA GAAAAAGACC TTACGAATTA GTTGCCTGTG TAATTAATGG TTTTAATATT
AAGAGTATGT ATGCTGGAGA TGAAAATAAA GAAAAATTAA ATAGATTAAG AGATCTATAT
GCTTTATTTA GAGATTTAGA TGATAAGAGT AAAGGGAATA GAGATGCCTT GTTAGATATT
ATAAGAATAA CAGGCCTTTC TAATGGAGAG TTAGAATCTT TAATAATAAA TAGAACTAAA
AAGCCTAGGA TACCAATAAT AACTGTGCAT CAAGCAAAAG GCTTAGAGTT TGATACTGTA
TTTTTAGCAG GTATTCAAAA TAATACATTT CCTTCTTATA TGGCTATTAA AGAGGGAAAT
TTAGCGGAAG AAAAAAGAGT ATTTTATGTG GCAATAACTC GTGCAAAGAA AAGGTTAGTT
ATAACTTATA ATTCTCAAGG AAAATATGGA CATAGAAATG AAATAAGTCA GTTTATAAAT
TATATTCCAA AGGAGTTTTT TAAAATTATA TAA
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| Protein sequence | MINLNEEQQK VVNEQKNNII LLASAGTGKT NTLAKRVTSI IKNGNSKPSE ILCITFTNKA
CKEMSDRVMK IVGGEAKDIT IRTFHSFCFD VVRTYAKRNT DIFSDFTIFD EDDCREVISK
LSYYYATSNL MATNMQIQRV IDFIKVERAR IETLEDRVLD EYKTVIDEIF KFREEKINGV
CTNKGNLNLN LKNYIKFHGH ELVTLYDSKL REDHALDFND LIILTKELFK DEKVVRALKN
KFKYINIDEV QDTSIIEYSI IEKLFEGNNV LICGDFFQTI YSWRGSDPEM IFNKFKEKYN
PVEIVFSKNY RATQNLNKAS LEFLNNAFSS KVSTMYKDGI LAESKEKGEK ILLKETRGGR
EEARFIFDYA NKLCEKGEDL KRVCVLTRDN NYNIGLSEEL YQIGGYEGAD FEFILVDQFK
FFRRQEVKDI LAFLKLIANR YDSLSLKRIV NRLPTGIGMR TLEAIESYKY KEVGIRLADY
IDPLVLEYGE KFSLLINEFE KENIIVFDVE STGVDVTEDE IIQIAAIKLN KNVEVVDKFE
KFLKNKKSVK DSYYVHGFSD EMLQRIGEEK EKVLKEFVEY SKDSIIVGHN VQYDINILCS
ELERNNLGKP KFKTFYDTLD IYRRFYPGNI NYKLENLSKV YDTKHKPSHD AMDDIIATGE
LLVRAINEKI KETSMERMAL MSKHLKAFTA ISKKLNELFQ IAERKRPYEL VACVINGFNI
KSMYAGDENK EKLNRLRDLY ALFRDLDDKS KGNRDALLDI IRITGLSNGE LESLIINRTK
KPRIPIITVH QAKGLEFDTV FLAGIQNNTF PSYMAIKEGN LAEEKRVFYV AITRAKKRLV
ITYNSQGKYG HRNEISQFIN YIPKEFFKII
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