Gene CPR_0333 details

Gene Information

• Locus tag: CPR_0333
• Symbol: uvrC
• ID: 4204175
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 400975
• End bp: 402837
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 642564890
• Product: excinuclease ABC subunit C
• Protein accession: YP_697662
• Protein GI: 110802431
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGATT TTCAACACCA ATTAAAGATA TTGCCTGATA AACCAGGAGT TTATATAATG 
AAAAATTCTC TTGGGGAAGT TATTTATGTA GGAAAAGCAA AGGTATTGAA AAATAGAGTA 
AGGCAATATT TTCAAAACTC TAAGAATCAC TCTGAAAAAG TTAGAGCTAT GGTTAAGAAT 
ATAGCTGAAT TTGAGTACAT AGTTACAGAT TCTGAAATGG AAGCGTTAAT TTTAGAATGT 
AATCTTATCA AGAAATACAG TCCAAGATAT AACATAGCCT TAAAGGATGA TAAGTTTTAT 
CCCTTTATAA AAATAACCAC TAATGAGGAT TTTCCAAGGG TTTATGTTAC AAGGAATTTT 
GCTAAGGATG GGAATAGATA TTTTGGACCA TACACTAATG GTACAGCCGT TTATGAGGTT 
ATGGGACTTA TAAAGAAGTT ATTTCCACTA AGAACCTGTA AAAAGGCTAT TGTGGAAGGT 
GGAGAGCCTA CAAGAGCATG TCTAAATTAT CATATTAATC TTTGTAAAGC TCCTTGTGCT 
GGTTATATAT CTAAGGCTGA GTACTGGAAA ATGATAGATG AAATTATAAA CATTTTAAAT 
GGTACAGATA CATCCATAAT AAAAAATTTA AAATTAGAGA TGGAAAAGGC TGCAGAAGAA 
TTAGAGTTTG AAAAGGCTGC TAAAATTAGA GATAGAATTT TGGCCATAGA ATTGATTAGC 
GAAAAGCAAA AAATGTTTAC TGTAAAAGAA GGCGATGAAG ATTTTATAGA CTTATATACT 
GATGAAAAAG ATGGATGTGC TCAAGTTTTC TTTGTTAGAG AGGGAAAAGT TACAGGCAGA 
GAGCATTTTA TGATTGAAAA TATTAGTGAT GATCCAGTTA AAGAGGTGAT AAGTTCCTTT 
ATAGCATCCT TTTATGGAGG AACTGCACAA ATACCTAAGA CTATCTATGT GCCAGAGGAA 
ATAGAGGATC AAGAGCTTAT AGAAAAGTTT CTTACAGAAA AAAGAGGATC TAAGGTTTGG 
ATAAAAGTCC CTAAGAAGGG GGATAAAAAG AATCTTTTAG ATATGGTTAG AAATAATGCT 
AAAATAATGC TTGATCAATT TAAAGAAAAG ATGGTTGAGG AAAAAGAGTT AAATAAGTCT 
GCCTTAATTG AACTTGCAGA TGTTTTAGGA TTAGATTCTT TGCCAACTAG AATAGAGGCC 
TATGATATAT CAAATATACA GGGTGTGGAC TCAGTAGGGA CCATGGTAGT TTTTGAAAAT 
GGGAAAGCTA AAAATTCAGA TTATAGAAGA TTTAAGATAA AAAGTGTTAA AGGTCCTAAT 
GATTATGAAA GCATGAGAGA AATATTAAGC AGAAGATTTT CTCATGGATT AGAGGAAGTA 
AATAAAATAA AAGAAAGAAA TTTGGAATAC TCAAAGGGTA AGTTTTGTAT TTTTCCAGAT 
TTGATAATGA TGGATGGTGG AAAAGGGCAA GTAAACATAG CCTTAGAGGT TCTAAAAGAC 
TTTGGTATAG AAATTCCCGT CTGTGGCCTT GTTAAAGACG ATAAGCATAG AACTAGAGGA 
ATTATATTCA ATAACGAAGA AATCCTTATT AGAAGGGGTT CAGGCCTTAT GAATCTAATA 
ACTAGAGTTC AGGATGAGGT TCATAGATAT GCCATAACAT ACCACAGAAG TTTAAGAGAT 
AAAAGAACCT TACATTCCAT ATTAGAAGAT ATACCTAGAA TTGGGGAAAA GAGAAGAAGA 
AATCTTCTTA TGAAGTTTGG AAGTATAGAT AATATTAAAA AGGCATCTAT GGAAGAATTA 
TTAGATACAC CAGGGATAGA CAAAAGAGCA GCAGAGAGTA TAAAACAATA TTTTTCAAGT 
TAA 

 

Protein sequence

MFDFQHQLKI LPDKPGVYIM KNSLGEVIYV GKAKVLKNRV RQYFQNSKNH SEKVRAMVKN 
IAEFEYIVTD SEMEALILEC NLIKKYSPRY NIALKDDKFY PFIKITTNED FPRVYVTRNF 
AKDGNRYFGP YTNGTAVYEV MGLIKKLFPL RTCKKAIVEG GEPTRACLNY HINLCKAPCA 
GYISKAEYWK MIDEIINILN GTDTSIIKNL KLEMEKAAEE LEFEKAAKIR DRILAIELIS 
EKQKMFTVKE GDEDFIDLYT DEKDGCAQVF FVREGKVTGR EHFMIENISD DPVKEVISSF 
IASFYGGTAQ IPKTIYVPEE IEDQELIEKF LTEKRGSKVW IKVPKKGDKK NLLDMVRNNA 
KIMLDQFKEK MVEEKELNKS ALIELADVLG LDSLPTRIEA YDISNIQGVD SVGTMVVFEN 
GKAKNSDYRR FKIKSVKGPN DYESMREILS RRFSHGLEEV NKIKERNLEY SKGKFCIFPD 
LIMMDGGKGQ VNIALEVLKD FGIEIPVCGL VKDDKHRTRG IIFNNEEILI RRGSGLMNLI 
TRVQDEVHRY AITYHRSLRD KRTLHSILED IPRIGEKRRR NLLMKFGSID NIKKASMEEL 
LDTPGIDKRA AESIKQYFSS