Gene CPF_2999 details

Gene Information

• Locus tag: CPF_2999
• Symbol: rrlA
• ID: 4202960
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 11869
• End bp: 14777
• Gene Length: 2909 bp
• GC content: 51%
• IMG OID: 640716557
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTCAAGCTAC AAAGGGCGCA TGGTGAATGC CTTGGCATCA GGAGCCGATG AAGGACGTGA 
TAAGCTGCGA TAAGCTTCGG GTAGGCGCAC ATAGCCTGAG ATCCGAAGAT CTCCGAATGA 
GGAAACTCAC ATGGGAAACC CCATGTATCA TTAAGTGAAT ACATAGCTTA ATGAAGGTAA 
CCCAGGGAAC TGAAACATCT AAGTACCTGG AGGAAGAGAA AGAAAAATCG ATTTTCTTAG 
TAGCGGCGAG CGAAAGGGAA AGAGCCCAAA CCGGAAACTT GTTTCCGGGG TTGTGGACAT 
AGCATCAAAG TGGAGGCTAT TGTAACTGAA GAGAACTGGA AAGTTCCACC GTAGAAGGTA 
ATAGTCCTGT AAGTGAAACG AGAAGACCAC GAGTTATGAT CCAGAGTACC ACGAGACACG 
TGAAACCTTG TGGGAAGCAG GGAGGACCAC CTCCCAAGGC TAAATACTAC CTGATGACCG 
ATAGTGAAGC AGTACCGTGA GGGAAAGGTG AAAAGAACCC CGGGAGGGGA GTGAAATAGA 
ACCTGAAACC GTGTGCCTAC AACCGCTCAG AGCCCCTTAT GAGGGTGATG AGGTGCTTTT 
TGTAGAACGA GCCAACGAGT TACGGTATGT AGCAAGGTTA AGTACTTAAG GTACGGAGCC 
GAAGGGAAAC CGAGTCTGAA TAGGGCGACT AGTTGCATGC CGTAGACCCG AAACCGGGTG 
ACCTATCCAT GGCCAGGTTG AAGCGAGGGT AAAACCTCGT GGAGGACCGA ACCACGTTGC 
TGTTGAAAAA GCATGGGATG AGCTGTGGAT AGCGGAGAAA TTCCAATCGA ACCCGGAGAT 
AGCTGGTTCT CTCCGAAATA GCTTTAGGGC TAGCGTCGAG TATGAGTAGT GGAGGTAGAG 
CACTGAATGG GCTAGGGGGC ATAGCGCTTA CCGAACCTTA TCAAACTCCG AATGCCACAT 
ACTTTGAGCT CGGCAGTCAG ACTACGAATG ATAAGATCCG TGGTCAAAAG GGAAACAGCC 
CAGATCGTCA GCTAAGGTCC CAAAGTGTAA GTTAAGTGGG AAAGGATGTG AGATTTCTAA 
GACAACTAGG ATGTTGGCTT AGAAGCAGCC ATTCATTAAA AGAGTGCGTA ATAGCTCACT 
AGTCGAGAGA TCTTGCGCCG AAAATGTAAC GGGGCTAAAC TTACCACCGA AGCTACGGGC 
TTGAACTTAT GTTCAAGCGG TAGGAGAGCG TCGTAACCGG GCTGAAGTCG TACCGTAAGG 
AGCGGTGGAC TGGTTACGAG TGAGAATGTT GGCATCAGTA GCGAGATGTG GGTGAGAATC 
CCACAGGCCG AAAACCTAAG GTTTCCTCAG GAAGGTTCGT CCGCTGAGGG TTAGTCGGGA 
CCTAAGCCGA GGCCGAAAGG CGTAGGTGAT GGACAACTGG TTGATATTCC AGTACCACTA 
CCATCGTTAT TATCGATGGC GTGACGCAGG AGGATAGTGT GTGCTAGCTA TTGGATGCTA 
GTCTAAGCGT TTAGGCAGTG AGAGTAGGCA AATCCGCTCT CATAATGCTG AGGCGTGATG 
GGGAAGGTTC TACGGAACCG AAGTACATGA TTCCACGCTG CCAAGAAAAG CGTCTAGAGA 
GAGAAGTAGT GCCCGTACCG CAAACCGACA CAGGTAGGTG AGGAGAGAAT CCTAAGGCCG 
GCGGAAGAAT TACAGTTAAG GAACTCGGCA AATTGACCCC GTAAGTTCGC GAGAAGGGGT 
GCCTACGAGA GTAGGCCGCA GAGAATAGGC CCAAGCAACT GTTTAGCAAA AACACAGGTC 
TCTGCTAAAG CGTAAGCTGA TGTATAGGGG CTGACGCCTG CCCGGTGCTG GAAGGTTAAG 
GGGAACACTT AGCGCAAGCG AAGGTGTGAA CTTAAGCCCC AGTAAACGGC GGCCGTAACT 
ATAACGGTCC TAAGGTAGCG AAATTCCTTG TCAGGTAAGT TCTGACCCGC ACGAATGGCG 
TAATGACTTG GGCACTGTCT CAACTGTAAA TCCGGCGAAG TTGTAGTGCG AGTGAAGATG 
CTCGCTACCC GCGATTGGAC GGAAAGACCC CGTAGAGCTT TACTGTAGCT TAGCATTGAG 
TTTTGGTATT GTCTGTACAG GATAGGTGGG AGACTAGGAA ATCAGGGCGT CAGCCTTGGT 
GGAGTCAACC TTGGGATACC ACCCTGACAG TACTGAAATT CTAACTGGCG GCCATGAATC 
TGGTCACAGG ACATTGTTAG GTGGGCAGTT TGACTGGGGC GGTCGCCTCC TAAAAAGTAA 
CGGAGGCGCC CAAAGGTTCC CTCAGAACGG TCGGAAATCG TTCGAAGAGT GCAAAGGCAG 
AAGGGAGCCT GACTGCGACA CCCACAAGTG GAGCAGGGAC GAAAGTCGGG CTTAGTGATC 
CGGTGGTACC TCGTGGGAGG GCCATCGCTC AACGGATAAA AGCTACCTCG GGGATAACAG 
GCTGATCTCC CCCAAGAGTC CACATCGACG GGGAGGTTTG GCACCTCGAT GTCGGCTCGT 
CGCATCCTGG GGCTGAAGTA GGTCCCAAGG GTTGGGCTGT TCGCCCATTA AAGCGGCACG 
CGAGCTGGGT TCAGAACGTC GTGAGACAGT TCGGTCCCTA TCCGTCGCGG GCGTAGGAAA 
TTTGAGAGGA GCTGTCCTTA GTACGAGAGG ACCGGGATGG ACTGACCTCT GGTGTACCAG 
TTGTTCCGCC AGGAGCACAG CTGGGTAGCT AAGTCGGGAA TGGATAAACG CTGAAAGCAT 
CTAAGCGTGA AGCCAACCTC AAGATGAGAT TTCCCATAGC GTAAGCTAGT AAGATCCCTT 
GAAGAACACA AGGTTGATAG GTCGGGGGTG TAAGCATGGT AACATGTTCA GCTGACCGAT 
ACTAATAGAT CGAGGGCTTG ACCAAATAT 

 

Protein sequence