Gene CPF_2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2993 
Symbol 
ID4202980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp3253895 
End bp3254518 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content31% 
IMG OID638083860 
ProductR3H domain-containing protein 
Protein accessionYP_697347 
Protein GI110800203 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAA TTGAGATTAC TGGAAAGACT GTTGAAGAAG CTTTAAAAAG CGCATTGGAA 
CAGTTGAACA CTACAGAAGA TAAAGTAGAG GTTACTGTTA TAGAAGAGGG AAGTAAAGGC 
TTCTTTAATT TAATTGGTGC AAAGCCTGCT AAAATTTCAG TTAAGGTGAA AAGAGATAGA 
ATCTTAGAGA CTAAAAAGTT TTTAAGGGAT ATTCTTGATA ACATGAATAT AGAAGCTGAA 
ATTAATATTG AAGAAAGTAA AGACCTAGTA AATATAAATC TTACTGGACC TAAGATGGGA 
GCCATCATAG GATACAGGGG GGAAACTTTA GACTCACTTC AATATTTAAC TAGTTTAGTT 
ATTAATAAGG CTAAAGAAGA CAAGTACAAA AGAGTGGTTT TAGACACTGA GAATTATAGA 
CAGAAAAGAG AAGAAACTCT TAAAAGATTA GCTAATAAAA TAGCTTATAA GGTGAGAAAG 
TCAGGTAAGA TATTAAAACT TGAACCTATG AATCCTTATG AAAGAAGAGT TATTCATTCA 
GAGTTACAGA ATAATGATTT TGTTAGAACT TTTAGTGAAG GTGAAGAACC TTACAGAAGA 
GTTGTAGTAG AATTAAAGAA ATAA
 
Protein sequence
MNTIEITGKT VEEALKSALE QLNTTEDKVE VTVIEEGSKG FFNLIGAKPA KISVKVKRDR 
ILETKKFLRD ILDNMNIEAE INIEESKDLV NINLTGPKMG AIIGYRGETL DSLQYLTSLV 
INKAKEDKYK RVVLDTENYR QKREETLKRL ANKIAYKVRK SGKILKLEPM NPYERRVIHS 
ELQNNDFVRT FSEGEEPYRR VVVELKK