Gene CPF_2977 details

Gene Information

• Locus tag: CPF_2977
• Symbol: ssb
• ID: 4202041
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 3240827
• End bp: 3241279
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 638083844
• Product: single-strand binding protein
• Protein accession: YP_697331
• Protein GI: 110800412
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0000497709
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAG TAGTTTTAAT TGGTAGACTT ACTAAAGATC CAGAGCTTAG ATTTGCAGCA 
GGAAGCGGTA CAGCAGTTGC AAGATTTACA CTAGCTGTAA ATAGACAATT CAAAAAAGAT 
GAAGCTGATT TTATCAGTTG CATAGCTTTT GGAAAAACTG GTGAGACCAT AGCTCAATAT 
ATTACTAAAG GCAGACAATT GGCTGTTTCA GGAAATATAA GAACTGGAAG TTATGAAGCT 
CAAGATGGAA CTAGAAGATA TACTACTGAC GTAGTTGTTG AAAGTTTTGA CTTTATCGAT 
TCAGGAAATG GCGGAGCAAG AGGAAACTCA GGCTTTGGTT CAGGAAATGA TTTCGGTGGT 
TCTTTCGGTA TGCCAGACAA TTCATTTAGT GATTCATCAT TCAATAGTAA TGATGATATG 
ACACCAATTG ATGATGGAGA CATTCCATTC TAA 

 

Protein sequence

MNKVVLIGRL TKDPELRFAA GSGTAVARFT LAVNRQFKKD EADFISCIAF GKTGETIAQY 
ITKGRQLAVS GNIRTGSYEA QDGTRRYTTD VVVESFDFID SGNGGARGNS GFGSGNDFGG 
SFGMPDNSFS DSSFNSNDDM TPIDDGDIPF