Gene CPF_2869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2869 
Symbol 
ID4203093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp3138325 
End bp3138930 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content28% 
IMG OID638083736 
Producthypothetical protein 
Protein accessionYP_697233 
Protein GI110799355 
COG category[S] Function unknown 
COG ID[COG3859] Predicted membrane protein 
TIGRFAM ID[TIGR02357] probable proton-coupled thiamine transporter YuaJ 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTTT ATTTAGTAGC TTTAATTGGA ATTTTAATAT TAGGTTTATA CATATTAGAT 
TTAAGAAAAC ATAAAATTAC AACAAGAGAA ATTATAATGA TTGGACTAAG TGTAGCTATT 
TCTTATGTGC TTTATATGAT ACCTTTAGTT AGATATCCTC AAGGTGGTGG AATAACTTTC 
TTTTCTATGC TTCCAATAAT GCTTTTATCA TTAGTATATG GAAGAACTGT TGGAGTTACA 
GGAGGATTAA TATTTGGGCT TTTAAAAATA TTAAATGGAG CTTTTATAGT ACACCCAGTA 
CAATTTTTAC TTGATTACAT ACTGTCAAAT ATGGCTTTAG GACTAGCAGG ATCATTTGGA 
ATAGATAAGA AATATAAAAT ATTCCTTGGT TCACTTATGG CTGGTAGTAT AAGTACTTTT 
GTAAGCATAG TATCAGGAGT GATTTTCTTT GGTCAATATG CTCCTCCAGG AATGAATTTA 
TGGATTTATT CAATAATTTA TAATACAAGC AGTGCAGGAG TTGAAAGTTT ATTAACAGCT 
ATAGTAATAA CAATAATGCC AATAAAAATG TTAGCTAAAA GAATGAAGCC TATAAATAAT 
ATATAG
 
Protein sequence
MSVYLVALIG ILILGLYILD LRKHKITTRE IIMIGLSVAI SYVLYMIPLV RYPQGGGITF 
FSMLPIMLLS LVYGRTVGVT GGLIFGLLKI LNGAFIVHPV QFLLDYILSN MALGLAGSFG 
IDKKYKIFLG SLMAGSISTF VSIVSGVIFF GQYAPPGMNL WIYSIIYNTS SAGVESLLTA 
IVITIMPIKM LAKRMKPINN I