Gene CPF_2827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2827 
Symbol 
ID4201586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp3090184 
End bp3090792 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content27% 
IMG OID638083694 
ProductHD domain-containing protein 
Protein accessionYP_697191 
Protein GI110801279 
COG category 
COG ID 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAATC AAAACTTATT TTTAGAAATA GAAAAGCACT TATTAGAGGA TGTTAAACCA 
TCCATATTCT TAAATAAAAT TAAAGAGGAA GAATCATTTA AAAATTCTTC TTTTAATATT 
TTCAACCAAC TTAATAAGGA AAATCAAATC CACCAATCCA ATCCTTGGAC CCATACATTA 
AATGTAGTAG ACCTAGCTTC AAAATACAAA GATTTATCTA ATAACTCAAA AGCTTTTATG 
TGGGCAGCCT TATTCCATGA TATTGGAAAA ATAAGAACTC TAAACCCAAT CCATGATAGA 
ATTGGAGGAG AAATAACAAG AAGATTCCTT AGAGAATATA GTGATGATAC TTACTTAAAC 
GAAAAAATTA TATCTCTAGT AAAGCATCAT TCTGCACCTA TATTTATTAT TAATAGAGTC 
TCCTATAGCA TAATAGATTT AATAAACACG GCAGATATTC ATGATGTTGC CTTATTATCA 
CTATGTAATA GGCTGGGAAA CCTAAGTTCT AAAAATAATG ACTTAGAGAA AAATCTTTTA 
GATAGTAATA AATTTCTTAA AATCATGTCT AGTAAAACCT GCTTACCATT AAAAGAAATA 
ATAGTATAA
 
Protein sequence
MTNQNLFLEI EKHLLEDVKP SIFLNKIKEE ESFKNSSFNI FNQLNKENQI HQSNPWTHTL 
NVVDLASKYK DLSNNSKAFM WAALFHDIGK IRTLNPIHDR IGGEITRRFL REYSDDTYLN 
EKIISLVKHH SAPIFIINRV SYSIIDLINT ADIHDVALLS LCNRLGNLSS KNNDLEKNLL 
DSNKFLKIMS SKTCLPLKEI IV