Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2643 |
Symbol | |
ID | 4203003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2908982 |
End bp | 2909281 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638083509 |
Product | TrpR-like protein YerC/YecD |
Protein accession | YP_697023 |
Protein GI | 110799881 |
COG category | [S] Function unknown |
COG ID | [COG4496] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01321] trp operon repressor, proteobacterial [TIGR02531] TrpR-related protein YerC/YecD |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGGAG TACAATCTAA ACTAAAAGGT AAGGATTTAG ATTTTTTATT TGAGGCTATA TTAAAGTTAG AAGATATAAA TGAATGTTAT AATTTTTTTG AAGATATATG CACTATTTCA GAGCTAAAAG CATTAGCGCA AAGATTACAT GTTGCAAAAA TGCTTAGGGA GAAAAAAACA TATACTGAAA TTGCAGAAGA GACTAAGGCT TCAACAGCTA CTATAAGTAG AGTAAATAGA TGTTTAAACT ATGGAGCAGA TGGTTACAAT AATATCTTAA ATAGATTAGA TGAGAAATAA
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Protein sequence | MNGVQSKLKG KDLDFLFEAI LKLEDINECY NFFEDICTIS ELKALAQRLH VAKMLREKKT YTEIAEETKA STATISRVNR CLNYGADGYN NILNRLDEK
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