| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2565 |
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| Symbol | |
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| ID | 4202103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2830836 |
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| End bp | 2831951 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638083432 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_696955 |
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| Protein GI | 110800339 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01174] cell division protein FtsA
[TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.21665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTTT CTGATATACT TAAGTCTCTT AAGAAGAAAA ATTCTGAGAA AAAGAATGAT
AAAAAAGGTA GTAAGAAAAA AGCTAAGGCT GTTATATGTA AAAAAGCTAT TTCTATTGAT
GTTGGAAGTG AGAATACCAA GGTTGTTGTT GGGAGATATC ATAAAAATAA GGTTAGTATA
GACAAGGCTT TTTCTTTTAA GACTCCGAAA GGCAGTATAG ATGATGGTCA TATTAATGAT
ATAGATAATT TAGCTATGGC TATTAATGAC GCTTTGGATT CTAATAATGT TAAGAATGAT
AATGTAATTT TCACTACAAA CAGCACTTCT ATTATAAATA GAACAATTAT TATTCCAAAG
GTTAATGAGG ATGAAATAGA ATCAGTTATT AAGTACGAAG TTCAGCAATA TCTTCCTATA
AACTTAGAGG ATCATATGAT TCAATATAAT GTTTTAGGAG AAAAGGTTAT TGAGGGAAAT
GAAAAGCTAG AGGTTTTAAT TGTTGTTTAT CCAAATAAGA TGGTTTATTC CTATGCAGAG
CTTGTTAATA AAATGGGTGG AAAACCCTAT GCTTTAGATT TAAATTATAA TTCTAAAAGA
AAAGCTTATT GCGTAATGAA TCCTGAAATA AAGGAGTCTA TTTTAAGTAT TGATATGGGA
GCAGAAAATA TAGCATTAAC AATAATGAAA GACAATGAGT TAATACTTAT AAAAACTACA
AAATCTTGTG GGAATTATTT AAATAGCAAA ATATCAAAGG TCTTAGAAAT TTCATTAGAA
AATGCAGAAA TGCAAAAGAG AGAAAATTGT AATTTGATGA ATAGAGAAGA AGGGCCTTTA
GAGCATGTTG TTAGAGAGGT TGTAGATTCT TGGTTTGATG AAGCTAGTAG AATAATTAAA
TATTATAAAA GTAAAAATAC TCAAAATAAT ATAGACAAGA TATATATTTG TGGAGGAAGT
TCAAACATAA AGGGACTAGA AAGATATGTA TCTACTAAAC TAAACATGAA AGTAAAGATA
GTTCAGGGAA ATAGTAATAT AGAATTTAAA AAAGGCGTTG AAGAAGTGAA TATTTCAGAA
TACATAAACG CTATTGGAGC CTTAATAAGA CTTTAG
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| Protein sequence | MDVSDILKSL KKKNSEKKND KKGSKKKAKA VICKKAISID VGSENTKVVV GRYHKNKVSI
DKAFSFKTPK GSIDDGHIND IDNLAMAIND ALDSNNVKND NVIFTTNSTS IINRTIIIPK
VNEDEIESVI KYEVQQYLPI NLEDHMIQYN VLGEKVIEGN EKLEVLIVVY PNKMVYSYAE
LVNKMGGKPY ALDLNYNSKR KAYCVMNPEI KESILSIDMG AENIALTIMK DNELILIKTT
KSCGNYLNSK ISKVLEISLE NAEMQKRENC NLMNREEGPL EHVVREVVDS WFDEASRIIK
YYKSKNTQNN IDKIYICGGS SNIKGLERYV STKLNMKVKI VQGNSNIEFK KGVEEVNISE
YINAIGALIR L
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