Gene CPF_2498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2498 
Symbol 
ID4201111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2769771 
End bp2770331 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content25% 
IMG OID638083363 
Productputative acyl-CoA thioesterase 
Protein accessionYP_696912 
Protein GI110798988 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAA TTTGTATAGG TGACTCTCTT ACCTTTGGCT ATGGTGTAGG ACAAGAAAAT 
TCTTGGGTTT CTCTTTTAAA TGATGAAAAA AACAAATTCA TAAACAAAGG GGTTAATGGT
GACACTTCAA CTGGTATTTT ATCTAGAATA TATGAAATCT TAAAATCAAG TGATTCTAAG
ATTTGTTTAA TTATGTGTGG CTCAAATGAT ATTATAATGA ATAAATCTAT TAGTTCAATT
ATTGATAATA TAAGGTTAAT GACTGATGAT TGTAATTCAC TTAATATAAA ACCAATAATT
TTATCTCCGC CTAAAATATA TGGTGATTTA GCTATTAAAA GGTGGGATTC TTCTATTGAT
TATGAAAAAT GTAATTCTAA GCTAGAGAAT TATACTAGAG AATTAAATTT ATTCTGTGAA
AAAAACAATT TGTTATTTAT AGACTTAAAC TCTAATCTTC CTTTTGATTC TTTAAATTAT
ACTGATGGAT TGCACTTAAG CATAAAAGGA AATATATTAG TATCTAACTT AGTAAAAATG
AGTTTAAAAA ATTATCTTTA A
 
Protein sequence
MNIICIGDSL TFGYGVGQEN SWVSLLNDEK NKFINKGVNG DTSTGILSRI YEILKSSDSK 
ICLIMCGSND IIMNKSISSI IDNIRLMTDD CNSLNIKPII LSPPKIYGDL AIKRWDSSID
YEKCNSKLEN YTRELNLFCE KNNLLFIDLN SNLPFDSLNY TDGLHLSIKG NILVSNLVKM
SLKNYL