| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2431 |
|---|
| Symbol | |
|---|
| ID | 4203680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2707314 |
|---|
| End bp | 2707973 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 24% |
|---|
| IMG OID | 638083296 |
|---|
| Product | competence protein FC |
|---|
| Protein accession | YP_696852 |
|---|
| Protein GI | 110800186 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
|---|
| TIGRFAM ID | [TIGR00201] comF family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGAG TCAGAGATAA GGTAGATTAT TTATTTCAAT GTTTTTTAGA AGCTATTTAT
CCAACAGAAG AAAAGTGTTA TGTATGCAAT AAAGATGGAG AAAAAATAAT TTGTGATAAA
TGCAAAGGTA AAATACAAAA GTTAAATGAA ACTCTGATTA TTGAAGAATG TGAAATGTTA
ATCTGTTCTT ATTATTCTTT TATAGTTAAG GATTTAATAT TAAGACTTAA ATATAAAGGA
GATTTTCATG CTGGTGAAAT ATTAGTTATG TTACTAGAAG AAAAAATAAA AGAATCAAAT
TTAGATGTTG ATTTTATAAC ATATGTTCCC GTAGCTAAGG ATTCCCTTAG AAAGAAGGAA
TTTAACCAAT GTGAATATTT ATCAAAAGAA TTAGGAAAGC GACTAGGGAT TAAATCCATA
GAAACTTTAA AAAAGAAAAA TAAAGTAAAA GAACAAAAGT CATTATCTAA AGAAGAAAGA
GAAAAAAATG TGAAAAATGC TTTTTATCTT AAAAGATATA GGAATTTAGA AGGAAAAAGT
ATTATACTTT TAGATGATGT AATGACTACT GGTTCTACAT TAAAGGCCTG TGTAAGAGAA
CTAAAAAAAA TTAAAGATAT TAAGATTTTT TTATTGACTA TTGCTAAAAG TAATATATAA
|
|---|
| Protein sequence | MERVRDKVDY LFQCFLEAIY PTEEKCYVCN KDGEKIICDK CKGKIQKLNE TLIIEECEML
ICSYYSFIVK DLILRLKYKG DFHAGEILVM LLEEKIKESN LDVDFITYVP VAKDSLRKKE
FNQCEYLSKE LGKRLGIKSI ETLKKKNKVK EQKSLSKEER EKNVKNAFYL KRYRNLEGKS
IILLDDVMTT GSTLKACVRE LKKIKDIKIF LLTIAKSNI
|
|---|
| |