Gene CPF_2430 details

Gene Information

• Locus tag: CPF_2430
• Symbol: raiA
• ID: 4201203
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2706323
• End bp: 2706862
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638083295
• Product: ribosomal subunit interface protein
• Protein accession: YP_696851
• Protein GI: 110799719
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1544] Ribosome-associated protein Y (PSrp-1)
• TIGRFAM ID: [TIGR00741] ribosomal subunit interface protein

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTAA CAGTACATGC TAAGAATATA GAGTTAACAA ATGCTTTAAA GGATTGTGTA 
GAAAAGAAAA TATCCAAGTT AAGCAAGTAT TTTGAACCAG GAGTTGAAGC AAAGGCCACT 
TTAAGCGTAG AGAAAAATAA ACAAATCATA GAAGTTATGA TTCCTTTTAA TGGAATATTA 
TTAAGAGGTG AAGAATCTAC AGACGATATG TATAAGTCAA TAGACTTAGT TGAAGAAAAA 
ATCGAAAGAC AAATAAGAAA ACAAAAAACT AGATTATCAA AGAAAAATAG ATATGATTCA 
TTAAGATTTG CTCATATAGA TCCAATAGAG GATATGAAAG AAGAAAAAGA AGCAAAAATA 
GTAAAAACTA AAAGATTTGA TGTTAAGCCA ATGGGAGCTG AAGAAGCCGT TTTACAAATG 
GAGCTTATAG GACATGACTT CTTTGTATTC CAAGATCCAG AGACAAATCA ACTAAATGTA 
GTTTATAAAA GAAAAGATGG TAATTATGGT TTAATTGAAC CAGGATTAGG CGAAGAATAA 

 

Protein sequence

MKVTVHAKNI ELTNALKDCV EKKISKLSKY FEPGVEAKAT LSVEKNKQII EVMIPFNGIL 
LRGEESTDDM YKSIDLVEEK IERQIRKQKT RLSKKNRYDS LRFAHIDPIE DMKEEKEAKI 
VKTKRFDVKP MGAEEAVLQM ELIGHDFFVF QDPETNQLNV VYKRKDGNYG LIEPGLGEE