Gene CPF_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2387 
Symbol 
ID4201346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2656226 
End bp2656933 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content29% 
IMG OID638083252 
Producthypothetical protein 
Protein accessionYP_696810 
Protein GI110799476 
COG category[S] Function unknown 
COG ID[COG5011] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGGTGC GATACTTAAT TAAATTTACT AAAGATGCAG ATATAAAATT TGTTTCTCAC 
TTAGATTTAA TGAGAACAAT TCAAAGAATA GTAAGAAGAG CTGAGCTTCC AGTTGAATAT 
TCAAAAGGAT TTAACCCTCA TATGGCCTTA GCAATAGCAC AACCTTTATC AGTTGGTGTA 
TATTCTGAGG GAGATTATCT AGACTTAAAT TTAACTGAAG ATATGAATGA AGAGGCAGTA 
AAAGAAAAGT TAAATGAATT CTCAGCAAAT GGTATTAGAT TTTTAGAAGT TTCAAAGAGT 
CCAGTTATAC ACAATGTTAA GAGATTACCA GCAGCTATGG CTCTTTTAGA TGCTGCAAAT 
TATACAATAA AAATAAGATA TAATGATATT TCTAAGGCTG AAGAAGAAGT TAATGCTTTA 
ATGGCTCAAA AAGAAATAAT AACAATAAAA AGAACTAAAA AAGGTGAAAA AGAAGCGGAT 
ATAAAACCAT TTATAAAAGA TTTTAAATGT TGGACTAAGG ACAATTATTT AATTGTAAAT 
ACAACTATAA GCTGTGGAAG TAGAGAAAAT CTTTCAGCAG ATCTTTTAGC AAATGTTATA 
AAAGAAAATA CATCAAATGT TAATGAAGAA GCTTTCGTAG AAATAAAAAG AGTTGAGATG 
TATGCATACA AAGGGGATAC ATTAGTTCCT CTATATAAAT ACATCTAA
 
Protein sequence
MKVRYLIKFT KDADIKFVSH LDLMRTIQRI VRRAELPVEY SKGFNPHMAL AIAQPLSVGV 
YSEGDYLDLN LTEDMNEEAV KEKLNEFSAN GIRFLEVSKS PVIHNVKRLP AAMALLDAAN 
YTIKIRYNDI SKAEEEVNAL MAQKEIITIK RTKKGEKEAD IKPFIKDFKC WTKDNYLIVN 
TTISCGSREN LSADLLANVI KENTSNVNEE AFVEIKRVEM YAYKGDTLVP LYKYI