Gene CPF_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2348 
Symbol 
ID4202274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2613709 
End bp2614014 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content26% 
IMG OID638083213 
ProductPadR family transcriptional regulator 
Protein accessionYP_696771 
Protein GI110799024 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.203957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAA AAGTTTTAAG AAAATTATTT TTAGGTTTTA TACATATCCA TATATTACAC 
CATGCAAAAG TTGAACCTTT TTTCGGATCA AAAATGATTG AAGAACTTAG GGAACATGGA
TATTCTATGA GTCCAGGAAC TTTATATCCA ATACTTCATA ATATGGAGAG AGATGGCTTA
CTACTAAGAA AAGATAGATT AATAGATGGT AAGATAAGAA AATATTATAG TATTACATCA
GAAGGTAATG AGATATTAGA AGAAGCTAAA AGTAAAGCAT TTGAATTATT TAAAGAAATA
AAATAA
 
Protein sequence
MQEKVLRKLF LGFIHIHILH HAKVEPFFGS KMIEELREHG YSMSPGTLYP ILHNMERDGL 
LLRKDRLIDG KIRKYYSITS EGNEILEEAK SKAFELFKEI K