| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2295 |
|---|
| Symbol | lepA |
|---|
| ID | 4201955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2543342 |
|---|
| End bp | 2545144 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638083160 |
|---|
| Product | GTP-binding protein LepA |
|---|
| Protein accession | YP_696718 |
|---|
| Protein GI | 110800481 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0481] Membrane GTPase LepA |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAA AGAAGTATAT AAGAAACTTT TCAATCGTAG CTCATATAGA TCATGGTAAA
TCAACATTAG CAGATAGACT TTTAGAGAAA ACTGGAACAT TAACTCAAAG GGAAATGGAA
CAGCAAGTAT TAGATACTAT GGAGCTTGAA AAAGAAAGAG GAATAACAAT AAAGTCTCAA
GCAGCAAGAC TTATCTATAA GAGAGAGAAC GGCGAAGAAT ATATATTAAA TCTTATAGAT
ACTCCAGGTC ACGTAGACTT TACATATGAA GTTTCAAGAA GCTTAGCAGC TTGTGAAGGT
GCTATTCTTG TAGTAGACGC TACTCAAGGG ATACAGGCTC AAACTTTAGC AAACTGTTAC
TTAGCATTAG ATAATGATTT AGAAATAGTA CCTGTTATAA ATAAGGTTGA CTTAGCTAGT
GCTAGACCAG ATGAAATAAA GCAAGAAATA GAGGATGTTA TTGGAATAGA AGCAGAGGAT
GCACCTTTAG TATCAGCTAA AACTGGATTA AACATAGAAG ATGTTTTAGA AGAGATAGTT
GAAAAAGTTC CAGCACCAGA GGGAGATGAA AATGCTCCAC TTAAAGCTTT AATATTTGAT
TCATACTATG ATAGTTACAA AGGAGTTGTA TGTCATATAA GAGTTAAAGA TGGTAAAGTT
AAGCCTGGAA CAAAAATTAA ACTAATGTCA ACAGACAAGG TTTATGAAGT AGTTGAAACA
GGAGTATTTA CACCAGCTTT AATGCCTTTA AAAGAAGGAT TAAGTGCAGG GGAAGTTGGA
TACATAACAG CTTCAATAAA GAATGTTAGA GATGCCAGAG TAGGTGATAC TGTAACAGAG
GCAGCTAGAC CAACAGAGGA GGCATTACCA GGATATAAAC CAGCTATACC AATGGTTTAC
TCAGGTATAT ACCCAGTTGA TGGAGCTAAG TATGAAGAAT TAAAAGAGGC ATTAGAAAAG
CTTCAAATAA ATGATGCTGC ATTATCATTT GAACCGGAAA CATCAGTAGC TTTAGGATTT
GGATTTAGAT GTGGATTCTT AGGATTATTA CACATGGAAA TAATTCAAGA GAGAGTTGAA
AGAGAATTTA ACTTAGATAT AATTACAACT GCACCATCAG TTATATACAA AGTAACTAAG
ACAAATGGAG AATCTTTTGA TTTAACAAAC CCAACAAACC TTCCTCCAAT GACAGAGATT
GCATACATGG AAGAGCCTGT TGTTAAGGCT TCAATTATAA CTCCAACTGA TTACACTGGA
GCTGTAATGG AATTATGCCA AGATAGAAGA GGTAAATTCA TAGATATGCA ATACTTAGAG
GAAACAAGAG TTGTTATACA TTATGAAATT CCATTAAATG AAATAGTATA TGACTTCTTC
GATACTCTTA AATCAAAAAC AAGAGGATAT GCTTCATTAG ATTACGAATT AAAAGGATAT
GAGCAATCAA AACTTGTTAA GTTAGATATT TTATTAAATG GAGACAACGT AGATGCTTTA
TCTATGATAG TTCCAGAAGT TAAGGCTTAT CAAAGAGGTA GAGCTATAGC TGAAAAACTT
AAAGAAATAA TTCCAAGACA CATGTTTGAA GTTCCAATTC AAGCAGCTGT AGGTTCAAAA
ATTATAGCTA GAGAAACTGT TAAAGCTATG AGAAAAGACG TATTAGCTAA GTGTTATGGT
GGAGATATTT CAAGAAAGAA AAAACTTCTT GAAAAACAAA AAGAAGGTAA GAAGAGAATG
AGACAATTAG GAACAGTTGA AGTTCCTCAA GAAGCATTCA TGTCAGTTTT AAAAGTTGAC
TAA
|
|---|
| Protein sequence | MDKKKYIRNF SIVAHIDHGK STLADRLLEK TGTLTQREME QQVLDTMELE KERGITIKSQ
AARLIYKREN GEEYILNLID TPGHVDFTYE VSRSLAACEG AILVVDATQG IQAQTLANCY
LALDNDLEIV PVINKVDLAS ARPDEIKQEI EDVIGIEAED APLVSAKTGL NIEDVLEEIV
EKVPAPEGDE NAPLKALIFD SYYDSYKGVV CHIRVKDGKV KPGTKIKLMS TDKVYEVVET
GVFTPALMPL KEGLSAGEVG YITASIKNVR DARVGDTVTE AARPTEEALP GYKPAIPMVY
SGIYPVDGAK YEELKEALEK LQINDAALSF EPETSVALGF GFRCGFLGLL HMEIIQERVE
REFNLDIITT APSVIYKVTK TNGESFDLTN PTNLPPMTEI AYMEEPVVKA SIITPTDYTG
AVMELCQDRR GKFIDMQYLE ETRVVIHYEI PLNEIVYDFF DTLKSKTRGY ASLDYELKGY
EQSKLVKLDI LLNGDNVDAL SMIVPEVKAY QRGRAIAEKL KEIIPRHMFE VPIQAAVGSK
IIARETVKAM RKDVLAKCYG GDISRKKKLL EKQKEGKKRM RQLGTVEVPQ EAFMSVLKVD
|
|---|
| |