Gene CPF_2262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2262 
Symbol 
ID4202944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2510113 
End bp2510802 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content28% 
IMG OID638083127 
Producthypothetical protein 
Protein accessionYP_696685 
Protein GI110800225 
COG category[R] General function prediction only 
COG ID[COG2384] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.21581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTAA GTAAGAGATT AAAAAGAATA GCAGAACATG TTGATAAATG TGAAAGTGTA 
GCTGATATAG GTACAGATCA TGGATACATA CCTATATATT TAGTTAAAGA AGGAATATGC 
AAAAAAGCAA TAGCTTCAGA TATAAATAAA GGACCTATAG AAAAAGCAAA GGTTAATGTT 
GCTTTTGAAG GGGTTTCAAA TAAGGTTAAA TGCCTTTTAG GACCAGGGCT TAATCCTTTA 
AAAGTAGGAG AAGTAAATGG AGTTATATTA GCTGGAATGG GTGGAAATCT AACTAGAGAT 
ATTTTATTAG CTGATATGGA TAAGGTAAAA AAGTATGATT TCATAATATT ACAGCCAGCT 
CAAAACCCAG AGGTTTTAAG AGAGTTTTTA TATAAGAATG ATTATGAAAT AATAGATGAA 
GATTTAATTA AAGATGAAGG CAGATTTTAT GAATTATTTA AAGTAAAATA CAATGAAAAT 
TCAGAAAAAC TAGTATTTGA GGATGGATTA TATTACGAAG TAAGTCCTTT ATTAAGAGAA 
AAAAATCATC CATTATTTAA GGAATTTATA GAAGAAAAAA TAAATAGATG TGAGACTATA 
TTAAGTTTTA TAAAAGAAGA TACAGAAGCG GCTAAAAAGA GAAAAAGTGA TTTAGAAGAA 
AAGATAAATA AACTTAAGGG GATGTTATAA
 
Protein sequence
MELSKRLKRI AEHVDKCESV ADIGTDHGYI PIYLVKEGIC KKAIASDINK GPIEKAKVNV 
AFEGVSNKVK CLLGPGLNPL KVGEVNGVIL AGMGGNLTRD ILLADMDKVK KYDFIILQPA 
QNPEVLREFL YKNDYEIIDE DLIKDEGRFY ELFKVKYNEN SEKLVFEDGL YYEVSPLLRE 
KNHPLFKEFI EEKINRCETI LSFIKEDTEA AKKRKSDLEE KINKLKGML