| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2225 |
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| Symbol | potC |
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| ID | 4203794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 2472673 |
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| End bp | 2473473 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638083090 |
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| Product | spermidine/putrescine ABC transporter, permease protein PotC |
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| Protein accession | YP_696649 |
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| Protein GI | 110799954 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAAAAA AGTTAGGTGA TTTTATTTCT AAATTTTATT TAGCCTTAGT ATTTATATTT
TTATATGCAC CAATAGTAAC ACTTATGGTA TTTTCATTTA ACAAAACAAA ATCTATGGCT
GTTTGGGGTG GCTTTACTTT TGATTGGTAT AGCTCCCTAC TTGAAAATGA TAGAATAATA
GCAGCTCTTT ATTATACAGT TTTAATAGCA GTAATAGCCT CTGTTGTTGC TACGGTTATA
GGGACTATAA GTGCTATAGG AATTAATAAT ATGAAAAAAG GTCCTAGAAC CTTATTATTA
AACGTAAACT ATTTACCTGT ATTAAATCCT GATATAGTTA CAGGTATTTC ATTAATGACT
TTATTCGCTA TTGGTGGAGT TTTATTTAAT TTAAAACCTG GTTTTTGGAC TATGCTTTTA
GCTCACATAA CATTTGATAT TCCTTATGTT ATATTATCTG TTTTACCTAA GCTAAGACAA
TTACCTCCAA ATCTAACTGA TGCGGCCTTA GATTTAGGAG CAAAACCATC TTACGCTTTA
AGAAAGGTAG TAATTCCTCA AATAATACCT GGTATAGCTG CAGGATTCTT AATAGCATTT
ACAATGTCAA TAGATGACTT TGTTATAAGT TTCTTCACTA CAGGTCCTGG TGTTTCTAAC
CTTTCTATAG AAATTTATTC TATGGCTAGA AGAGGTATTT CTCCAGAAAT AAATGCTCTT
TCAACATTAA TGTTTATAGT TGTCTTAGCA TTACTTCTTA TTGCTAATAG AAAACAATCT
TTAGTAAAGG GGGAACGTTA A
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| Protein sequence | MVKKLGDFIS KFYLALVFIF LYAPIVTLMV FSFNKTKSMA VWGGFTFDWY SSLLENDRII
AALYYTVLIA VIASVVATVI GTISAIGINN MKKGPRTLLL NVNYLPVLNP DIVTGISLMT
LFAIGGVLFN LKPGFWTMLL AHITFDIPYV ILSVLPKLRQ LPPNLTDAAL DLGAKPSYAL
RKVVIPQIIP GIAAGFLIAF TMSIDDFVIS FFTTGPGVSN LSIEIYSMAR RGISPEINAL
STLMFIVVLA LLLIANRKQS LVKGER
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