| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2170 |
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| Symbol | |
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| ID | 4202585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 2406391 |
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| End bp | 2407812 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638083035 |
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| Product | cell envelope-related function transcriptional attenuator |
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| Protein accession | YP_696594 |
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| Protein GI | 110799661 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.582429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAA AGAAACACTT TAATTTTAGT AAAAAACAAA AAATAACTAT ATTTTCTTTA
TTAGCTATCC TTATATTAAT CGCATCTGTA GTAGGCTTTT TTGTTTTTAG ATTTTACAAC
CACTCCTACG AAGGAAATAC GGATCCTGCT AAAGTTAATA CTGTAGATGA AGATATTAAG
TTTAAAGAGG TTCCAGGAAT AACAAATATT CTTTTGCTTA GTAGCGATGC TAGACCTGGA
GAAGATGTAT CTAGATCGGA TTCTATAATG ATCTTAACAA TAGATAATAT CAATAAAAAG
TTAAAAGTAA CTTCTTTAAT GAGAGATATG TTAGTAAAAA TAGATGGTCA CGGAGAAGAA
AAGTTAAATC ATGCCTTTGC TTATGGTGGT CCTACTAAAA CAATTGAAAC TATTCAAAAT
AATTTCGGAA TAAAATTAAA TAATTATGTA ATCGTAGATT TTAATGCTTT TGTTAAGGTT
ATAGATGCTA TAAACGGAAT TGAAGTAACA GTTAAAGATT ATGAACTTGA TGAACTTAAT
AAATATATTT TAGATGGTGG CGGTTCTGAA GAAGATTTAC TTCCTTCACC TGGAACTTAT
AATCTTAATG GTTATCAAGC CTTATCTTAT GCTAGAATTA GAAAAGTTGG TAATGGTGAA
TATGAAAGAA CTGAAAGACA GAGAGCTGTT CTTCAAATCG CTTTAGAAAA AGTTAAAGAT
ATGTCAACAG TTAAACTTGT TTCCCTGCTT AATGAATTAT TCCCATATGT AAAAACTAAT
ATTTCCTTAG GAAATGCTAT GGATTATGGA TTTACAGCTT TAAATGTAGG TAAAAAGTGT
AACTTTGAAA TAGAACAATT TAGAGTTCCT CTAGATAGTA TTTCAAAAGG TGGAATCATT
AATAATAAGG GTTGGGTCTT TGTTATTGAT AAGGTAGAAA CATCAAAGGC TCTTCAAGAG
TTCATATTTA ATGACAATAA AAATTATGAG CCTGATACTA GTAATTTTGA CTCTATAATA
GAACAATACT TTAATGACTA TGATATTAAA GATGATACTA CTCACCCAGA TTATGAATAT
GTACCTAGTA TAAATACTAA TGGAAATTTT GAAAAACCTA AAAATAATTC TGGCAATAGT
AGTAATAATA ATTCTAATAA TAAAGTAGAA AAACCTTCTA ACCAAGGAAA TAGTGTAAAT
TCTTCTAATA AACCAAGTAA TGGAAGCACT TCTACTGGTA ATAATTCTAC AGAAAAACCT
AATACTTCAG AAAAACCAAG TATTCCTCAA GAAACTCCAA CAGAAAAACC GTCTGAAAAT
AATGGTTCTA GTGGAAATGG AGAATCCTCT AACACGCAAT CTAATAATGG AAATACTTCT
TCTAAAAATA GTAATAATCA AAATAATACT GAAGGAAATT AA
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| Protein sequence | MDKKKHFNFS KKQKITIFSL LAILILIASV VGFFVFRFYN HSYEGNTDPA KVNTVDEDIK
FKEVPGITNI LLLSSDARPG EDVSRSDSIM ILTIDNINKK LKVTSLMRDM LVKIDGHGEE
KLNHAFAYGG PTKTIETIQN NFGIKLNNYV IVDFNAFVKV IDAINGIEVT VKDYELDELN
KYILDGGGSE EDLLPSPGTY NLNGYQALSY ARIRKVGNGE YERTERQRAV LQIALEKVKD
MSTVKLVSLL NELFPYVKTN ISLGNAMDYG FTALNVGKKC NFEIEQFRVP LDSISKGGII
NNKGWVFVID KVETSKALQE FIFNDNKNYE PDTSNFDSII EQYFNDYDIK DDTTHPDYEY
VPSINTNGNF EKPKNNSGNS SNNNSNNKVE KPSNQGNSVN SSNKPSNGST STGNNSTEKP
NTSEKPSIPQ ETPTEKPSEN NGSSGNGESS NTQSNNGNTS SKNSNNQNNT EGN
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