| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2158 |
|---|
| Symbol | |
|---|
| ID | 4201633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2395958 |
|---|
| End bp | 2396695 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 638083023 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_696582 |
|---|
| Protein GI | 110801132 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4976] Predicted methyltransferase (contains TPR repeat) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGTT ATAAGATGAT GGCAAAAGTG TATGATGAAC TTATATATGA AGATGTAAAC
TATGAGAACA TAGCAGAATA CGCCTTATCA AAATGTGATA AGTATAATAT TAATAAAGAA
ATGTATTTAG ATTTAGCTTG TGGAACAGGA AATGTTGGTG TTCATGTAGG AAAATCCTTC
AAAGAAAATT ATTTTGTTGA TCTTTCACAG GATATGCTTA TAGAAGCAGA TAAAAAGCTT
AGAGAACATA GAGTTAGAGG TAAGATAGTT TGCCAAGATA TGTGTGAGTT AGGGTTAAAT
AGAAAGTTTG ATTTAATAAC ATGTGTTTTA GATTCAACAA ATTATATTTT AGATGATGAA
AGTGTAGAAA ATTATTTAAG AGGGGTATAT AATCATTTAA AAGAGGATGG TTTATTTATA
TTTGATATAA ATTCATACTA TAAAATATCA GAAGTATTAG GCAACAATGT CTACACATAT
GATAGTGAAG AATTATTTTA TGCTTGGGAA AATATTTTTG AGGATGAAAT AGTAGAGATG
AATTTAAATT TCTTTGTGAA AGATGGAGAA AAGTATGAAA GATTCACAGA AGTTCATGAA
GAAAGAGCTT ATAAGGAAAG TGAAATAGAA TATATTCTTG ATGTAATAGG TTTTAAAATA
GTAGAAAAGC ATAATGGTTA TACAGATGAT GAAGTAACAC CAGATACTGA GAGAATAGTT
TATATAGTAA AAAAATAA
|
|---|
| Protein sequence | MKSYKMMAKV YDELIYEDVN YENIAEYALS KCDKYNINKE MYLDLACGTG NVGVHVGKSF
KENYFVDLSQ DMLIEADKKL REHRVRGKIV CQDMCELGLN RKFDLITCVL DSTNYILDDE
SVENYLRGVY NHLKEDGLFI FDINSYYKIS EVLGNNVYTY DSEELFYAWE NIFEDEIVEM
NLNFFVKDGE KYERFTEVHE ERAYKESEIE YILDVIGFKI VEKHNGYTDD EVTPDTERIV
YIVKK
|
|---|
| |