Gene CPF_2036 details

Gene Information

• Locus tag: CPF_2036
• ID: 4202368
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2277134
• End bp: 2277616
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 638082903
• Product: PRC-barrel domain-containing protein
• Protein accession: YP_696467
• Protein GI: 110800448
• COG category: [S] Function unknown
• COG ID: [COG3881] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTATAGAA TAAGAGATTT AATTGGTCTT AAGGTTTTTG ATTCTAATGG AAAAAAGGTT 
GGAGTAGTTT GTGATCTTGC TATAGATTAT TTTAATGGGA AAGTCATGGG CTTTATAATA 
ACAAAAAAAT TATTTTCAAA AAGAGATTAT GTGGACTTAA CTAATGTTAT TTCTTTAAGC 
GATACTATTA TGACAGAAGG GGTACATGTA CATAGAGGGT TAAAATTTAG CGAGATAAAA 
AACTTTGATC TTATAAATAA GGATGGCCAT ATGATAGGAA TATTAGAAGA TATTTTAATA 
GATTACGACT TTTATATAAG AGGACTAATA GTGGTAAGTG GATTAGTTGA TAAATTTAAA 
AATGGAAAGC GAGTTATACA ATTAAAAGAA ACTATTTTAG GAGAAGAAAG CATTTTATTT 
TTTGGCAATA AAAATATAAA TATGAGAATG ATTCCAAGAA AATATTTTGG CGAGGTAAAT 
TAA 

 

Protein sequence

MYRIRDLIGL KVFDSNGKKV GVVCDLAIDY FNGKVMGFII TKKLFSKRDY VDLTNVISLS 
DTIMTEGVHV HRGLKFSEIK NFDLINKDGH MIGILEDILI DYDFYIRGLI VVSGLVDKFK 
NGKRVIQLKE TILGEESILF FGNKNINMRM IPRKYFGEVN