| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1963 |
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| Symbol | trmD |
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| ID | 4201728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2203295 |
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| End bp | 2204005 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638082832 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_696396 |
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| Protein GI | 110799681 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATTA ATATTCTTAC ATTGTTCCCA GAGATGTTTG ATATATTTAA ACATAGCATA
ATAGGAAGAG CTAGGGAAAA TGGTTTTCTA CATATAGAGA CGGTAAATAT AAGAGATTAT
ACTTTAAATA AGCATAAGAA GGTAGATGAT TATCCTTATG GTGGCGGAGC AGGAATGGTT
ATGACTCCTC AGCCAGTTGT AGATGCTATA AAGGCTGTTA AAGAAAAAAA TAAGGGTAAG
GTTATATTTT TAGGACCAAG AGGAAAAACT TTCAATCAAG AAATGGCTAA GGAACTTTCT
AAAGAGGAAG AGCTTATTTT TGTTTGTGGG CACTATGAAG GTATAGATCA AAGAGTTTAT
AAATATTTTG ATTTAGAAAT TTCTCTTGGA GATTTTGTGT TAACAGGTGG AGAAATGGCA
TGTATTCCAG TTATTGATAG CATATCTAGA TTAGTACCTG GTGTTTTAGG AAGTGAAGAG
AGTTTCCAAG ATGAAAGTTA TTATGATGGG ACTTTAGAGT ATCCACAATA CACAAGACCT
TTTGAATTTG AAGGAGAGAA AGTTCCAGAG GTTCTTATGT CAGGTCATCA CGAAAATATA
AGAAAGTGGA GAAGAAAACA ATCACTTCTT ATAACTAAGG AAAGAAGACC AGATATGTTT
GAAAAAATTA AACTTTCAAA AGAAGACATA AAATTGTTAA AATCAAAATA A
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| Protein sequence | MKINILTLFP EMFDIFKHSI IGRARENGFL HIETVNIRDY TLNKHKKVDD YPYGGGAGMV
MTPQPVVDAI KAVKEKNKGK VIFLGPRGKT FNQEMAKELS KEEELIFVCG HYEGIDQRVY
KYFDLEISLG DFVLTGGEMA CIPVIDSISR LVPGVLGSEE SFQDESYYDG TLEYPQYTRP
FEFEGEKVPE VLMSGHHENI RKWRRKQSLL ITKERRPDMF EKIKLSKEDI KLLKSK
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