Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1938 |
Symbol | |
ID | 4203877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2175907 |
End bp | 2176860 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638082807 |
Product | DHH subfamily 1 protein |
Protein accession | YP_696371 |
Protein GI | 110800883 |
COG category | [R] General function prediction only |
COG ID | [COG0618] Exopolyphosphatase-related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATTTC ATGATGTAAT ATCAATTATA AATAAAAGCA AAAAAATTGG TATAACATAT CATGTATCTC CAGATGGTGA TGCCTTAGGT AGTGTCTTAG CACTACTTCA AGGCATTAGA ATTTATGGTA AAGAAGCTTA TGTTATCTCT AAAGACCTAG TCTCAGATAA CCTAAGCTTT CTGCCTTATG CTGAGGAAAT AACTGGAGAA GTTATAAAGC CATCAGAAGA TACTGATTGT GTTATAGTAT TAGATTGTGG AAATGTTGAA AGAATTTCTG CAGATTTAAT CGAATTCAAA GGAAATTTAG TTAATATGGA TCATCATTTA TCAAATGATA AATATGGTAT TGTTAACTAT GTAGATACAG AGGCTTCTGC AACAGCTGAA ATAATATTTA TGCTACTTAA GGAGCTAAAG ATTGAAATTA ATGAAAATAT AGCTAAATGT CTATATACAT CATTAATAAC TGATACAGGT TCTTTTAGAT ACTCAAATTC TACTGAAAGA ACTCATATAA TAGCAGGGGA ATTAGTTAAT TATATAAAAC ATGATGAAAT TCATAGAAAT ATATTTGATA ATAAGCCTTT TGCTAAAATG AAACTAATGT CTTTAGTTTT AGGAGACATG GAGCTAGTTT GCAATAATAA AATAGTTCTT ATGAGAATTA CTAAAGAGAT GATAGATTCT ATTGGAGAAG AAGTTCAAAA TAGTTCAGAT GTTGTATCCT TAGGAAATCA AATAAAAGGT GTAGAAGGAT GCATACTTCT TAAAGAGGTA GATGAGGGAG TAAAGGTTAG CTTAAGATCT AAAGATACAT TAGATGTTAG AAAAATTGCA GAAAACTTTG GTGGCGGTGG TCATACAAAG GCTTCTGGAG CATTCATTAA AGGTGTAAGT ATAGACGAAG CTAAAAATAA AATATTAGAA ATACTTGCAA AAGAGATGGT GTAA
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Protein sequence | MRFHDVISII NKSKKIGITY HVSPDGDALG SVLALLQGIR IYGKEAYVIS KDLVSDNLSF LPYAEEITGE VIKPSEDTDC VIVLDCGNVE RISADLIEFK GNLVNMDHHL SNDKYGIVNY VDTEASATAE IIFMLLKELK IEINENIAKC LYTSLITDTG SFRYSNSTER THIIAGELVN YIKHDEIHRN IFDNKPFAKM KLMSLVLGDM ELVCNNKIVL MRITKEMIDS IGEEVQNSSD VVSLGNQIKG VEGCILLKEV DEGVKVSLRS KDTLDVRKIA ENFGGGGHTK ASGAFIKGVS IDEAKNKILE ILAKEMV
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