6 homologs were found in PanDaTox collection
for query gene CPF_1896 on replicon NC_008261
Organism: Clostridium perfringens ATCC 13124



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008261  CPF_1896  hypothetical protein  100 
 
 
108 aa  204  3e-52  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1615  hypothetical protein  97.22 
 
 
108 aa  201  4e-51  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2261  hypothetical protein  30.56 
 
 
108 aa  52.4  0.000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1692  Late embryogenesis abundant protein  33.33 
 
 
107 aa  50.8  0.000006  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2370  hypothetical protein  27.62 
 
 
107 aa  45.8  0.0002  Thermoanaerobacter sp. X514  Bacteria  normal  0.0381324  n/a   
 
 
-
 
NC_011832  Mpal_2683  V-type H+-transporting ATPase subunit E  29.41 
 
 
109 aa  41.6  0.003  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.216431 
 
 
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