Gene CPF_1860 details

Gene Information

• Locus tag: CPF_1860
• Symbol: msrB
• ID: 4202592
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2096013
• End bp: 2096456
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 638082730
• Product: methionine sulfoxide reductase B
• Protein accession: YP_696294
• Protein GI: 110799668
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase
• TIGRFAM ID: [TIGR00357] methionine-R-sulfoxide reductase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000145695
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAATATA CAAAGAAGGA AAAAGAGGAA TTAAAAAAAG TCTTAACTGA GGAAGAATAT 
TATGTTACTC AAGAAAATGG AACTGAAAGA CCTTTTACAA ATGAATATTG GGACTTTAAT 
GGAGAAGGAA TATATGTAGA TATAACTACT GGAGAGCCTT TATTTACTTC AAAGGATAAA 
TTTCATTCTT CTTGTGGATG GCCTGCCTTT TCAAAACCAA TAGATAGAAG CATAATAAAA 
GAAAAGGTAG ATAAAAGTCA TGGAATGATT AGAACAGAAG TTAGAAGTAA ACTAGGAGAT 
TCACATTTAG GCCATGTGTT TTGTGATGGA CCAGAGGAGT TAGGTGGATT AAGATATTGC 
ATAAATTCTG CTTCTTTAAA ATTTATTCCA AAGGAAGAAT TAAAGGAAAA GGGATATGAA 
GAATATTTAG AGCTTTTTAA ATAG 

 

Protein sequence

MKYTKKEKEE LKKVLTEEEY YVTQENGTER PFTNEYWDFN GEGIYVDITT GEPLFTSKDK 
FHSSCGWPAF SKPIDRSIIK EKVDKSHGMI RTEVRSKLGD SHLGHVFCDG PEELGGLRYC 
INSASLKFIP KEELKEKGYE EYLELFK