Gene CPF_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1754 
Symbol 
ID4202390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1972936 
End bp1973223 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content32% 
IMG OID638082626 
Producthypothetical protein 
Protein accessionYP_696190 
Protein GI110799198 
COG category[S] Function unknown 
COG ID[COG0011] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00106] uncharacterized protein, MTH1187 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00503928 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACTT GTAATGTTAG TTTACAAATA CTTCCCTCAG TAGAGGATTC AAGGCTTTAT 
GAAGTTGTTG ATAAGGTTAT TGAATATATA GAATCAACAG GAGTAAAGTT TGAGGTTGGT
CCTATGGAAA CTACCATGGA AGGAAAAATT GATGATTTGC TAGAAATTGT GAAAAAATCT
CAAGAAATAT GCATAGAAGA AGGTGCTGGA AGAGTTATAT CAATAGTTAA AATTGATTAT
AAAAAAGGCG GAGTAACCAT GGATGAAAAG GTTGGAAAAT ATAGATAA
 
Protein sequence
MDTCNVSLQI LPSVEDSRLY EVVDKVIEYI ESTGVKFEVG PMETTMEGKI DDLLEIVKKS 
QEICIEEGAG RVISIVKIDY KKGGVTMDEK VGKYR