| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1726 |
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| Symbol | |
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| ID | 4203063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1949348 |
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| End bp | 1950232 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 638082598 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_696162 |
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| Protein GI | 110799268 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000302117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTA GAAAGTTAAA AATATTTTTT GAAACAGCTA AATGTTTAAA TATGACTAAA
GTAGCTAAGT CTATGTATAT AAGTCAGCCA TCTATAAGTC AAGCCATAGC TGAATTAGAA
AGTGATCTTG ATGTTAAACT TTTTGATAGA ATAGGTAAAA GGCTTTATCT CACTCATGAG
GGTGAAGTAT ACTTTGAATA TAGTAGAAGA ATTTTAAACC TTTATGAAGA GGCAAATAGT
ACCATTAGAA GTAGTAAAGA AGGTCAAAAA GGGAAAATAG TTATAGGTGC AAGTACAACA
ATAGGTATAT ATATACTTCC AGAGTTAATA AAGGAATTCA ATGAGTTACA TAAAAATATA
GAAATCTCTT TAATAATAGA GAATACACAG TTAATAGAAG AGCTTATTAT GGAAAATAAG
GTTGATATTG CTTTAGTAGA AGGATATGTA AAATCAGATG AATTAGAAGT TTTTGATATA
GGAAAGGATG AGTTAATATT TATAGCAAAT CCTAATAATC CTATATTTTC AAAGGATAAA
ATAACTTTAA AAGACTTAGA AGATGAAAAA TTTATTATGA GGGAGCCTGG AAGTGGTACA
AGAGAAATTA TAGAAAATTA TCTTATAAAC AAAGGGTGCA ACTACAATGT ATATATGGAA
CTTGGAAATA CAGAGGCTAT TGTAAGAGTT GTAGAAACAG GACTTGGTAT AGCCTGTGTT
TCTTGTAAAG CTATAGATGA AAGAATCAAT GAAGGCTTAA TTAAAGAAAT AAAAATAGAT
GATATTAAGG TAAGTAGAGA TTTATATCTT ATATATCATA AGGATAAATT TATTTCTAAA
AACTTAGAAA TATTTATAGA TAAAATTAAA AATTCAGATA TATAA
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| Protein sequence | MNFRKLKIFF ETAKCLNMTK VAKSMYISQP SISQAIAELE SDLDVKLFDR IGKRLYLTHE
GEVYFEYSRR ILNLYEEANS TIRSSKEGQK GKIVIGASTT IGIYILPELI KEFNELHKNI
EISLIIENTQ LIEELIMENK VDIALVEGYV KSDELEVFDI GKDELIFIAN PNNPIFSKDK
ITLKDLEDEK FIMREPGSGT REIIENYLIN KGCNYNVYME LGNTEAIVRV VETGLGIACV
SCKAIDERIN EGLIKEIKID DIKVSRDLYL IYHKDKFISK NLEIFIDKIK NSDI
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