| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1622 |
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| Symbol | |
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| ID | 4201682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1839695 |
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| End bp | 1840390 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082500 |
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| Product | putative proton-coupled thiamine transporter YuaJ |
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| Protein accession | YP_696065 |
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| Protein GI | 110798629 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3859] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02357] probable proton-coupled thiamine transporter YuaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0335216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGTCAT TTTCACAAAT AATAAATGAT TTTATTCAAA GTTTTTCATC AATTAATTTA
GGAGGAAATT TTAAGGAGAT TGTAACTAAT CCACTAACAA TTCTCACTTT AATAGGAGTC
CTAATAATAT TAGTTTTACT TATAAAGGCT AAAGACATCA AATTTGATGC AAAAATGCTT
ACAACAATAG GAATTGCTTT AGCACTTACT GCTGTATTAA ACATGCTAAA GATATATAAA
TTTCCTCAAG GTGGAGGAAT AACTTTAGGC AGTATGATTC CTATAATACT TATTGCTTAT
GCTTATGGTC CATTAGTTGG AATGCTTACT GGATTTTTAT TTGGTATAAT TTCCTTATTT
ATAGATCCAT ATATCCTTCA TCCTGTACAA GTATTATTTG ATTATCCTAT ACCATATATG
GCATTAGGGG TAGCAGGATT CTTTAAAAAT CATAGAATTT CAGGAGCTGT AGTAGCAATA
TTTTTAAAAT TTTTGGCTCA CTTTATTTCA GGAGTTGTTT TCTTCGGATC CTTTGCTCCT
GAAGGAATGT CTCCAATTCT ATATTCATTT TTAGTAAATG GTTCTTTAAT AGGTGCTGAT
GGCTTAATAT GTGTAGTACT TTTAGGTATT TTACCTGTTA ATAGACTTAT TAAAGCTATA
AGTTCTAAAA GCGTAACAAG CAAATACGCA TCTTAA
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| Protein sequence | MMSFSQIIND FIQSFSSINL GGNFKEIVTN PLTILTLIGV LIILVLLIKA KDIKFDAKML
TTIGIALALT AVLNMLKIYK FPQGGGITLG SMIPIILIAY AYGPLVGMLT GFLFGIISLF
IDPYILHPVQ VLFDYPIPYM ALGVAGFFKN HRISGAVVAI FLKFLAHFIS GVVFFGSFAP
EGMSPILYSF LVNGSLIGAD GLICVVLLGI LPVNRLIKAI SSKSVTSKYA S
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