Gene CPF_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1580 
Symbol 
ID4201550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1800301 
End bp1800648 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content26% 
IMG OID638082458 
Producthypothetical protein 
Protein accessionYP_696023 
Protein GI110800467 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00249746 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGTTTG ATATTATTGC TTTGGTAGCT GATAGTTTAA GTAGTTTAGA TATTCCAGTA 
TTTGAAGGTT GGTATGATGA AGAGCTAAAA AAAACACATA TTACATTCTT TGAATATTTA
GAAGCTCCAG AGGATTTTTT AGATGATGAA GAAGTTTCAA TTACTCATAA TATACAAGTT
GATATATGGA CAACTAATAG TGAAGAAGGA TTGAAGTTAA AAAATAAGGT CAAGAAATTA
TTAAAAGATA ATGGATTTTT ATTAGAGGAT AGTAATGATC AATTTGAAGT AGATGTGAAA
ATTTATCATA AAGCTATGAG ATTTAATTAT AGCGAAGAAT TAGATTAA
 
Protein sequence
MEFDIIALVA DSLSSLDIPV FEGWYDEELK KTHITFFEYL EAPEDFLDDE EVSITHNIQV 
DIWTTNSEEG LKLKNKVKKL LKDNGFLLED SNDQFEVDVK IYHKAMRFNY SEELD