| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1499 |
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| Symbol | |
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| ID | 4202633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1710142 |
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| End bp | 1711131 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638082377 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_695942 |
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| Protein GI | 110799536 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00502134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCAT TTCAATCATT AATAATAATA CTTATATGTA TTTTATCCAT AATTATAATT
TTATATTTAA TAGAGTCAGA TAATTTTCTG CCAGAAAAAC AAATAAGGAA ATATGTCTCT
CTAGGGAAAT TTAAACATGC TCTTTATCTT TTAGACAAGT ATTCAAAAAA ATTAGATCCT
CTATTTTTCT ATAATAATAA AATTTTAGTA CTATCAAAGC AAAAAGATTT TGATGCAGCC
TATGAACTTT CCATAGAGGC AATAAAAAAG CTTAAAGAAC CTAACTATGA ACTTTACAAT
AATATTGCAT TTGTATATTA TAATCTAAAA CTTTACCATA GAGCCATAGA TTTTTCAGAA
AGAGCCTTAA AATTAAATCC TATAGATACC TTTGCTTTAA GCAATAAAGG TTTCTCTTAT
ATTGAAATAG GAGAATACTC TAAAGCTGAG GAATCTTTTG ATAAAGCACT TGAGTTTAAC
CCTTGTTTTA AAAACGCCTT ATCAGGGAAG GCATACTGTG CTTTTGAAAA TGGTGATTAT
CTTCTTGCTA CTAAATATCT TGAAGATTTT GTTTCAATTG AAAAAAACAA TGCCTCTGCT
TATAAAAAAT TAGGAGAATG TTACTTTCTT TTAAATGACT TAAAAAACAG TTCTAAAATG
TACGAGAAAT CCTTAGAAAT AGATCAAGAA AATGATGCTT CTTATTGTGA ATATGCAAAT
GTACTTCTTT GCTTAGGTCA CTATGATAAG GCACTAAACA ATTTAAATAA GGCCCTTGCC
ATATCCCCAT ATAACTTTAT GGCCTTTTAT TATAAAGCAA GAGCTTATTC ATTAAAAAAA
GATTTTGATA ATGCCTTTTA TTATTTAGAA AGAGCCTTTA ACTATTGTGA CTCCTTAAAA
GAAATAGCTC TTAAGGATGA GATGCTTACA AACTTAAAAT TTTTCTCAAA GTTTAGTGAA
TTATTAGAGA TTCATAATAT ACAAAACTAA
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| Protein sequence | MTSFQSLIII LICILSIIII LYLIESDNFL PEKQIRKYVS LGKFKHALYL LDKYSKKLDP
LFFYNNKILV LSKQKDFDAA YELSIEAIKK LKEPNYELYN NIAFVYYNLK LYHRAIDFSE
RALKLNPIDT FALSNKGFSY IEIGEYSKAE ESFDKALEFN PCFKNALSGK AYCAFENGDY
LLATKYLEDF VSIEKNNASA YKKLGECYFL LNDLKNSSKM YEKSLEIDQE NDASYCEYAN
VLLCLGHYDK ALNNLNKALA ISPYNFMAFY YKARAYSLKK DFDNAFYYLE RAFNYCDSLK
EIALKDEMLT NLKFFSKFSE LLEIHNIQN
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