| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1477 |
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| Symbol | |
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| ID | 4202021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1675029 |
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| End bp | 1676075 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082355 |
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| Product | ABC transporter, substrate-binding protein |
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| Protein accession | YP_695920 |
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| Protein GI | 110800354 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0040976 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AAATTTTAGC AACCTTATTA ACAGGATTAG TACTAGGGAC ATCTTTAGTT
GGATGTGGAA AAACAGAAGG AGCAGAGGCA GGAAAAAAAT TAGTAGTTTC AACTTGGGGA
TTAAATGAAG ATGTATTAAA GGAGACAGTA TTTGAACCAT TTGCTAAAGA ACATGGTGTG
GAAATAGTTT TAGATATAGG TAATAACTCA GAAAGATTGA CTAAGATGAA AAATAATCCT
AACTCACAAA TAGATATAAC TTATTTAGCA GAATCTTTTG CAGAGCAAGG AGTAGAAGCA
GGTATATTCG ATAAATTAGA TTATTCAAAG ATTCCTAATG CAAGTGAGAT GAATGAAAAG
GCTAAATCTA CAGTAGAGGC AGGATATGGA CCAGCATATA CATTAAATAG TATAGGAATA
GTTGTAGATC CTTCAGCAGG AATTGAAATA AATTCTTGGG AAGATTTATG GAAACCAGAA
CTTAAAAATA AAATAGCTAT ACCAGATATT ACAACAACTA ATGGTCCAGC AATGGTAGAA
ATAGCAGCAG AAAAGGCAGG AGTAGATGTT AAAACTGATA ATGGAGAAGC TGCATTTAAA
GAATTAGAAG CTTTAAAACC AAATGTTGTT AAAACTTATA GTAAATCTTC AGATTTAGCT
AATATGTTCT CAAATGGTGA AATAGTAGCT GCTGTAGCAT CAGACTTTGC TTTTGGAACA
ATTTCAAAAG CTAAACCAGA GGTTATAAAT GTAATACCTG AGTCAGGAAC TTACTTAAAC
TTTAATACAA TAAATATAAA TAAAAATTCT AAAAATAAAG ATTTAGCTTA TGAATTTATT
AACTATGCAT TAAGCAAAGA AGTTCAGGAG AAAACTGCTA AAGCTTTAAA TGAATCACCA
GTTAATAAAG AAGTTAAATT AAGTGAAGAA GAAACTAAAA ACTTAACATA TGGACCAGTG
GTTGATAATG CTAAGGTAAT TGACTTTAAG TTTGTTAATT CAGTAATGGA TCAATGGGTT
AATAACTGGA ACAGAATAAT GAACTAG
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| Protein sequence | MKKKILATLL TGLVLGTSLV GCGKTEGAEA GKKLVVSTWG LNEDVLKETV FEPFAKEHGV
EIVLDIGNNS ERLTKMKNNP NSQIDITYLA ESFAEQGVEA GIFDKLDYSK IPNASEMNEK
AKSTVEAGYG PAYTLNSIGI VVDPSAGIEI NSWEDLWKPE LKNKIAIPDI TTTNGPAMVE
IAAEKAGVDV KTDNGEAAFK ELEALKPNVV KTYSKSSDLA NMFSNGEIVA AVASDFAFGT
ISKAKPEVIN VIPESGTYLN FNTININKNS KNKDLAYEFI NYALSKEVQE KTAKALNESP
VNKEVKLSEE ETKNLTYGPV VDNAKVIDFK FVNSVMDQWV NNWNRIMN
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