Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1375 |
Symbol | |
ID | 4203215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1551763 |
End bp | 1552497 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638082256 |
Product | haloacid dehalogenase, IB family protein |
Protein accession | YP_695821 |
Protein GI | 110799920 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like [TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0035145 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAA AAAACATAGC AGCATTTTTT GATATTGATG GAACAATATA TAGAGAAGGA TTAATAACAG AAGTATTTAA AAAAATAATA AAATACGAAT TAGTTGATGA AACTAAGTGG TATAAGGATG TACGTCCATC ATTCATAAAA TGGGATAAAA GACAAGGTGG TTATGATGAA TATTTACTAA AAATGGTTGA TATATATACT GAAGCAATAA GAGGAATAAG CAATCATCAT ATAGAGTATA TAGCTAAGAA AGTAATAGAA CAAAAAGGGG ATAGGGTTTA TACATTTACT AGAGAAAGAA TTAAATGGCA TAAAGAACAA GGTCATATTG TCATAGCTAT TTCTGGATCT CCTTATGAGC TTGTAAAAGA AATGTCAGAA AAATATAATA TGAATGATTT TAAAGGAACT ATATATAAGC TTGATCATAA CAATACATAT AACGGAGATA TAATTCCAAT GTGGGATTCT GAAAGCAAAG AAAAAGCTAT CTTAGAATTA AAAGAAAAAC ATAATATAGA CTTAGAAAAT AGTTATGCTT ATGGAGATAC CTCTGGAGAT TTTACAATGT TTAAAAATGT TGGAATACCA TATGCAATTA ATCCAACAAG AGAGCTTATC ACTAAAGTTC TTCAATGTGA TGAAATTAAG GAGAAAATTA AAGTAATAGT TGAAAGAAAA GATGTTACTT ATGATTTAGA TATAAATAAC TTAAAACTTC TTTAG
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Protein sequence | MKEKNIAAFF DIDGTIYREG LITEVFKKII KYELVDETKW YKDVRPSFIK WDKRQGGYDE YLLKMVDIYT EAIRGISNHH IEYIAKKVIE QKGDRVYTFT RERIKWHKEQ GHIVIAISGS PYELVKEMSE KYNMNDFKGT IYKLDHNNTY NGDIIPMWDS ESKEKAILEL KEKHNIDLEN SYAYGDTSGD FTMFKNVGIP YAINPTRELI TKVLQCDEIK EKIKVIVERK DVTYDLDINN LKLL
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