| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1360 |
|---|
| Symbol | miaA |
|---|
| ID | 4202869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 1537532 |
|---|
| End bp | 1538464 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 638082241 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_695806 |
|---|
| Protein GI | 110800286 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.055152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATA ATTTACTTAT TATTGCTGGG CCAACAGCCG TAGGGAAAAG TGACCTTTCA
GTAGATCTAG CAAAGAAGCT AAATGGTGAA ATAATATCTG TTGACTCTAT GCAAATATAT
AAATACATGG ATATAGGTTC AGCTAAAATT TCTAAGGAAG AAATGGGAGG CGTCCCTCAC
TATTTAATAG ATTTTGTTGA TCCTAGTAAG GAGTTTAGTG TAGCTGAATT TAAAGACTTA
GCTACAGAAA AAATTAAAGA TATACAAAGT AGAGGAAAAC TTCCTATATT AGTAGGAGGA
ACTGGACTAT ATATAAATTC AATCATATGC AATATGAATT TTGCAGAAAG TGATAAGGAT
GAAGAGTATA GAGAAGAGCT TGAAAAAATA GCTAATGAGC ATGGAAATGA ATATTTACAT
GAGATGCTAA AAGATATTGA TTTAGAAAGC TATAATTCAA TACATTTTAA TAATAGAAAA
AGAGTAATTA GGGCATTAGA AACTTATAAG TTAACTGGAA AACCATTTTC ATCTTTTAAA
GCTAAGAATA GTATTTATGA AACTCCATAT AATATATATT ATTATGTACT TAATATGGAT
AGAGCAAAGC TTTATGACAG AATAAACAAA AGAGTTGATA TAATGTTTGA AAAAGGTCTT
TTAGAAGAGG TTAAGAATCT TAAAGCCATG GGATTAACTG ATGATATGCA GTCTATGAAA
GGTATAGGAT ACAAAGAAGT TTTATATTAT CTTGATGGTA AAATCTCTTT AGAACAATGC
ATAGAGATGA TTAAGCAAGG TAGCAGAAAC TATGCTAAAC GTCAGCTTAC TTGGTTTAGA
AAGGATCCTA GAGCTATATT TATAGATAAA GATACTTTCG CCTCTGAAGA AGATATTTCT
TCCAAAATTA TTAATGACAT AATAAATTCT TAG
|
|---|
| Protein sequence | MNNNLLIIAG PTAVGKSDLS VDLAKKLNGE IISVDSMQIY KYMDIGSAKI SKEEMGGVPH
YLIDFVDPSK EFSVAEFKDL ATEKIKDIQS RGKLPILVGG TGLYINSIIC NMNFAESDKD
EEYREELEKI ANEHGNEYLH EMLKDIDLES YNSIHFNNRK RVIRALETYK LTGKPFSSFK
AKNSIYETPY NIYYYVLNMD RAKLYDRINK RVDIMFEKGL LEEVKNLKAM GLTDDMQSMK
GIGYKEVLYY LDGKISLEQC IEMIKQGSRN YAKRQLTWFR KDPRAIFIDK DTFASEEDIS
SKIINDIINS
|
|---|
| |