Gene CPF_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1342 
Symbol 
ID4201879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1516603 
End bp1517397 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content25% 
IMG OID638082223 
Productacetyltransferase 
Protein accessionYP_695788 
Protein GI110798763 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0732306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAG TTAGATTTAA TTTGTGGGAT TATTTTAAAT ATGCAAGAAT TTTAAATTTA 
TCACTAAAAA GGCTATGTAC TAATTATTTT GTCAAAGTAA CTTATAAAAA TGAGGTTTAT
ATGCTTTGGG AAATAGATTA TGTAGCAAAC TTTGATGCAT ATATAAAAAA AATTACTAAG
ATAGGTAGCA TGAGAAGTAT TCCTGAAGAA AGTGGTGTTT TTTCAGAGTT TAATATAAGT
AAATATATAT ATGAAACTGC AAAAGAAGAT GAGGGAATTG ATTTAAAAAT TTATGGGTTT
GAAAAGAGGG CTTCTAATAT AATGTTAAAG ATAGATATTT CTAATTTTAA TAAAAAGAAT
AATGAAAATT TCACTTTCAC CCATTTTGTA AAGGGAAGAG ATGAAAGTAT TCGTTGTAAG
GTACAAAATG AGATCTTTTA TGAAGAAAAC AGAATTCCAC TAAAAACAAA AGATATTGTT
TATGAATGTA ATAGAAAAGC TTTTTTAGAG GATTTAGCAT TTTTTGAATT AAAAGATGAT
ACAATAATTG GATATGGTCA AATATTACTT TTAAAGGATA AATACACTAT TGCTAACTTT
GGAATAATAG AGGAGTTTAG AGGTAAAGGA TATGGTGAAG CTTTACTTAT ACACATATTA
AATCAGGCTA AGATAAAAGG ATTAAAGGAA GTATATATAA AGGTTAAGTC TGATAACATA
AATGCTATAA ATTTATATAA AAAGACTGGC TTTGAAGAAG CTTCTGAAAT AAGTATATAT
GAATTGTTAG GATAA
 
Protein sequence
MNIVRFNLWD YFKYARILNL SLKRLCTNYF VKVTYKNEVY MLWEIDYVAN FDAYIKKITK 
IGSMRSIPEE SGVFSEFNIS KYIYETAKED EGIDLKIYGF EKRASNIMLK IDISNFNKKN
NENFTFTHFV KGRDESIRCK VQNEIFYEEN RIPLKTKDIV YECNRKAFLE DLAFFELKDD
TIIGYGQILL LKDKYTIANF GIIEEFRGKG YGEALLIHIL NQAKIKGLKE VYIKVKSDNI
NAINLYKKTG FEEASEISIY ELLG