Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1342 |
Symbol | |
ID | 4201879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1516603 |
End bp | 1517397 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 638082223 |
Product | acetyltransferase |
Protein accession | YP_695788 |
Protein GI | 110798763 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0732306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATAG TTAGATTTAA TTTGTGGGAT TATTTTAAAT ATGCAAGAAT TTTAAATTTA TCACTAAAAA GGCTATGTAC TAATTATTTT GTCAAAGTAA CTTATAAAAA TGAGGTTTAT ATGCTTTGGG AAATAGATTA TGTAGCAAAC TTTGATGCAT ATATAAAAAA AATTACTAAG ATAGGTAGCA TGAGAAGTAT TCCTGAAGAA AGTGGTGTTT TTTCAGAGTT TAATATAAGT AAATATATAT ATGAAACTGC AAAAGAAGAT GAGGGAATTG ATTTAAAAAT TTATGGGTTT GAAAAGAGGG CTTCTAATAT AATGTTAAAG ATAGATATTT CTAATTTTAA TAAAAAGAAT AATGAAAATT TCACTTTCAC CCATTTTGTA AAGGGAAGAG ATGAAAGTAT TCGTTGTAAG GTACAAAATG AGATCTTTTA TGAAGAAAAC AGAATTCCAC TAAAAACAAA AGATATTGTT TATGAATGTA ATAGAAAAGC TTTTTTAGAG GATTTAGCAT TTTTTGAATT AAAAGATGAT ACAATAATTG GATATGGTCA AATATTACTT TTAAAGGATA AATACACTAT TGCTAACTTT GGAATAATAG AGGAGTTTAG AGGTAAAGGA TATGGTGAAG CTTTACTTAT ACACATATTA AATCAGGCTA AGATAAAAGG ATTAAAGGAA GTATATATAA AGGTTAAGTC TGATAACATA AATGCTATAA ATTTATATAA AAAGACTGGC TTTGAAGAAG CTTCTGAAAT AAGTATATAT GAATTGTTAG GATAA
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Protein sequence | MNIVRFNLWD YFKYARILNL SLKRLCTNYF VKVTYKNEVY MLWEIDYVAN FDAYIKKITK IGSMRSIPEE SGVFSEFNIS KYIYETAKED EGIDLKIYGF EKRASNIMLK IDISNFNKKN NENFTFTHFV KGRDESIRCK VQNEIFYEEN RIPLKTKDIV YECNRKAFLE DLAFFELKDD TIIGYGQILL LKDKYTIANF GIIEEFRGKG YGEALLIHIL NQAKIKGLKE VYIKVKSDNI NAINLYKKTG FEEASEISIY ELLG
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