Gene CPF_1314 details

Gene Information

• Locus tag: CPF_1314
• Symbol: nadE
• ID: 4203081
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 1491920
• End bp: 1493827
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638082195
• Product: NAD synthetase
• Protein accession: YP_695760
• Protein GI: 110799343
• COG category: [H] Coenzyme transport and metabolism; [R] General function prediction only
• COG ID: [COG0171] NAD synthase; [COG0388] Predicted amidohydrolase
• TIGRFAM ID: [TIGR00552] NAD+ synthetase

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0103341
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTCA TAAAAGTAGG TGCAGCTTCA CCTAAATTAA AAATAAGCGA TACAAAATAT 
AATCTTAAAG AAATAGAAAC TATGATTTTA AATGCTATAG AAGAAGAAGT TAAGGTTTTA 
GTTTTTCCTG AGCTAAGTAT ATCAGCATAC TCTTGTGGTG ATTTATTTAC CAACAAAAAG 
TTAATTGAAA ATTGTAATTT AGCAATAAAA AATCTAGTTG AATTTTCTAA AGGCAAAGAT 
ATTTTAATGG CTGTTGGTGC TCCTTTTTTA TATAGATATT CCTTATATAA TTGCGCATAT 
GTAATATTAA ATGGAAAAGT TTTAGGTATA GTGCCAAAAA GCTACATACC AAACTACTCT 
GAGTTTTATG AAAAAAGATG GTTTACAGAA GGTTTTAATA TAAAAGGATT AAATGTTGAT 
TTAGATTTTC AAAAGGAAGT ACCTTTTGGA ACTGATTTAA TATTCTCATT TAAAAATTTA 
AAAGTAGGTT TTGAAATTTG TGAAGATCTT TGGGTTACTA TACCACCTAG CTCTAATTTA 
GCTTTAATGG GTGCTAACCT TATTTGTAAC CTTTCAGCTT CTAATGAACT TGTATCAAAA 
AGTTCTTATA GAAAATCATT AGTTCAAAAC CAAAGTGCTA GAACAATGTG TTCTTATATT 
TATTCTTCAG CAGGAGTTCA TGAATCAACT ACAGATTTAT TATTTAGTGG TCACATGATA 
ATAGCTGAAA ATGGAACTAT TATAAAAGAA AATAATAGAT TCAAAAGAGA AAATGATTTA 
TTAACTGGTA TAGTTGATTT ATTTAAATTA GACGCAGAAA GAATAAAAAA TATAAGTTTT 
AGAAATTCAA CTTTTAATGA AAATAATGAA CCTAGATTTA TTCCTTTTAA TTTAGAAAAT 
ACAGAGATTA AAAACTTTGA TAGAGAAATA GATAAACATC CTTTCTTACC AAAATCTCAG 
TATGCTATGG AAGCACGTTG TGAAGAAATA TTAAACATAC AAGCTGCTGC CCTTGCTAAA 
AGATTAGAGC ATACAAACCT TAAGAAAGCA GTAATTGGTA TTTCAGGAGG ATTGGATTCT 
ACTCTTGCCC TATTAGTTGT GGTAAAAACC TTTGATATGC TAAATATACC AAGAGAAAAT 
ATAATAACTA TAACTATGCC TGGTTTTGGA ACTACAGATA GAACTTATAA TAATGCAGTA 
ACTTTATGCA AGGAACTTCA CTGTGATTTT AGAGAAATAA ATATAGTAAA TGCTGCTCTT 
CAACATTTTG AAGATATAGG ACATGATAAA GATATTCATG ATGTAACATA TGAAAATGTT 
CAAGCAAGAG AAAGAACTCA AATACTTATG GATTTAGCTA ATAAGGAAGG TGGATTATTA 
ATAGGTACTG GAGATCTTTC TGAACTAGCT TTAGGATGGT GTACTTATAA TGGAGATCAT 
ATGTCAATGT ACTCAGTAAA CTGCTCTATT CCTAAAACTT TAGTTAGATT CTTAGTTAAT 
TATTTTGCTA ATCATGAAAT TTCAAATGAT GCTAAGGAAG CTTTATTAGA TATTTTAGAT 
ACTCCTGTAA GTCCAGAATT ATTACCAAAG GATAAAGAAG GTAAAATAGC TCAGAAAACA 
GAAGACATTG TTGGCCCTTA TGAACTTCAT GATTTCTTCT TATATCATTT TATAAAGCAT 
GGATCAAGTC CTGAAAGAAT ACTATTCTTA GCTAAGGAAG CATTTAAAAA TGATTATAAT 
GAAGAAACTC TAAAAAAATG GCTAGATAAG TTTATAAGAA GATTCTTTAC TCAACAATTT 
AAGCGTTCTG CTCTTCCAGA TGGACCAAAG GTTGGTTCTA TATCACTTTC TCCTAGAGGT 
GATTGGAGAA TGCCTTCAGA TGCTGTATAT AATGACTTTT TAATTTAG 

 

Protein sequence

MDFIKVGAAS PKLKISDTKY NLKEIETMIL NAIEEEVKVL VFPELSISAY SCGDLFTNKK 
LIENCNLAIK NLVEFSKGKD ILMAVGAPFL YRYSLYNCAY VILNGKVLGI VPKSYIPNYS 
EFYEKRWFTE GFNIKGLNVD LDFQKEVPFG TDLIFSFKNL KVGFEICEDL WVTIPPSSNL 
ALMGANLICN LSASNELVSK SSYRKSLVQN QSARTMCSYI YSSAGVHEST TDLLFSGHMI 
IAENGTIIKE NNRFKRENDL LTGIVDLFKL DAERIKNISF RNSTFNENNE PRFIPFNLEN 
TEIKNFDREI DKHPFLPKSQ YAMEARCEEI LNIQAAALAK RLEHTNLKKA VIGISGGLDS 
TLALLVVVKT FDMLNIPREN IITITMPGFG TTDRTYNNAV TLCKELHCDF REINIVNAAL 
QHFEDIGHDK DIHDVTYENV QARERTQILM DLANKEGGLL IGTGDLSELA LGWCTYNGDH 
MSMYSVNCSI PKTLVRFLVN YFANHEISND AKEALLDILD TPVSPELLPK DKEGKIAQKT 
EDIVGPYELH DFFLYHFIKH GSSPERILFL AKEAFKNDYN EETLKKWLDK FIRRFFTQQF 
KRSALPDGPK VGSISLSPRG DWRMPSDAVY NDFLI