Gene CPF_1275 details

Gene Information

• Locus tag: CPF_1275
• ID: 4201639
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 1449884
• End bp: 1450357
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 638082156
• Product: HDIG domain-containing protein
• Protein accession: YP_695721
• Protein GI: 110801138
• COG category: [R] General function prediction only
• COG ID: [COG1418] Predicted HD superfamily hydrolase
• TIGRFAM ID: [TIGR00277] uncharacterized domain HDIG

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000140423
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGAGAA TAAATAAGAT ACTTAATAAT AGTAAGTATA AAGACTATTT AAATAAGAAT 
TCTTTCTGTG AAAAGGATAG GATTTTTTGT AAACATAACT TAGAGCATTT TTTAGATGTA 
TCAAGAATTG CCTACATAAT GGTCTTAGAG GAAAATATGA ATGTATCTAA GGAAATTATA 
TATGCAATAG GACTTCTCCA TGATATAGGA CGATGGGTAG AATATGAAGG TGGAGAAAAA 
CATAATAAAG CTTCTTATAA ATTGAGTTTG GATATTTTAA AGGAATGTGA TTTTAATAAA 
GAGGAAATAG AGATTATTTT AAGTGGAATT TTAAATCACA GAAATAGTGA AGCAGAAGGA 
TTAGATAAAA TTATTTACTT AGCTGATAAA AAATCAAGAA GCTGTTTTTT ATGTAATGCT 
GAAAAACTTT GTAAGTGGAG CAAAGAAAAA AAGAATTTAG ACATAATTAT TTAA 

 

Protein sequence

MERINKILNN SKYKDYLNKN SFCEKDRIFC KHNLEHFLDV SRIAYIMVLE ENMNVSKEII 
YAIGLLHDIG RWVEYEGGEK HNKASYKLSL DILKECDFNK EEIEIILSGI LNHRNSEAEG 
LDKIIYLADK KSRSCFLCNA EKLCKWSKEK KNLDIII