Gene CPF_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1240 
Symbol 
ID4203872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1411035 
End bp1411805 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content32% 
IMG OID638082121 
Producthypothetical protein 
Protein accessionYP_695686 
Protein GI110800878 
COG category[S] Function unknown 
COG ID[COG4395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0197113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT TAAGAAAGAT TTTAAGTATA ATGTTAATAC TATTATTTTT AATTCCATCC 
ACAACAGTTC TTTGTCGTGC CGGCGGTGGT GGCGGAGGTG GCGGTGGTGG CGGTGGCGGC
GGTGGTGGAG GATCTTCTTC ACATAGCTCC CATGGAAGCA GCTCAGACTC CCCTTATGGA
AATATGATTG ATTTCTTGAT ATTAGGTTCA TTCATAGGAA TAAATTTCTT GTTTGTGAAA
AACGGAAGTG TATCTAGATA TAAAGTTTAT TCTAAAAAAA GAGAAGCTAT GTCTACTCTA
AAAGACTTTG AGATTGAAAA TCCAGCATGG AATTTCTATG AAATAGAAAC TCAGATTGAA
GAATCCTTTC CTATAATTCA AGAGGCTTGG ATGAATAGGG ATTATTCACC TGTAAAACAT
TTAATGACAG ATAACTTTTT TGATACTCAT ACTGTAAAAA TGAATTGGAT GCTTTTAAAG
AAGGAAAAGA ACATCTTATC TGATGTAGAA TTAAAGAAGG TAACCCCTAT ATTAGCAGTA
GAAAATGATG AAAATGGAGA GGATTTTATT TGGGTTTTAT TAAAGGCTAA AATGATTGAT
TACACTATAA ATGAAGAAAA TAATTGCATA ATTGATGGAG ACTATTCAAC AGCAAATTCT
TTTGAAGAAT TTTGGAAATT TATAAGAAAA GAGGATAAAT GGTTAGCTGA TACAATACTT
CAAGTAGATG ATATTGAATC TCTTGACTAC TTTGATAAAT TGAAGCCTTA A
 
Protein sequence
MKNLRKILSI MLILLFLIPS TTVLCRAGGG GGGGGGGGGG GGGGSSSHSS HGSSSDSPYG 
NMIDFLILGS FIGINFLFVK NGSVSRYKVY SKKREAMSTL KDFEIENPAW NFYEIETQIE
ESFPIIQEAW MNRDYSPVKH LMTDNFFDTH TVKMNWMLLK KEKNILSDVE LKKVTPILAV
ENDENGEDFI WVLLKAKMID YTINEENNCI IDGDYSTANS FEEFWKFIRK EDKWLADTIL
QVDDIESLDY FDKLKP