Gene CPF_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1239 
Symbol 
ID4202250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1410448 
End bp1410915 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content32% 
IMG OID638082120 
Producthypothetical protein 
Protein accessionYP_695685 
Protein GI110800620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0286424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATT GGCAAATATC AGCAGAGATA GGTAACACAA ATTTAATAGA TATATTCTTT 
GATTTAGGAG TAGCAATTGT TGGCCCTGGA GACAAAGGAG ATTATTTTGA CAATAAAGAA
GAGTACGATA TATTAGGCAA AGAGGGAATA GTTATAAAGA GATTTGCTGA AGAAGTTAAG
GTAGGAGATG TACTTATTTT AAAACAGATA AATTCAAAGG ATGGAAGCTT TACTATTGTA
GCAGCTGGTA AAGTAACAAG TCCATATAGA TTTGAACCTG TATTTAACAA AGTAGGACTA
GATGAATTGC CTATGCAGCA CTGTAGAAGG GTAAAATGGT ATATTCCTAC TGATGGCTTA
GTAATAGATA AAGAAGGGTT AAGTATTGGA TTACAAAAGC TTAAGGATGA TAGCCCACTA
AAAATAAAAG CTCAAGAATT TATGAATGAA TTAAAGGATG AAAATTAA
 
Protein sequence
MNYWQISAEI GNTNLIDIFF DLGVAIVGPG DKGDYFDNKE EYDILGKEGI VIKRFAEEVK 
VGDVLILKQI NSKDGSFTIV AAGKVTSPYR FEPVFNKVGL DELPMQHCRR VKWYIPTDGL
VIDKEGLSIG LQKLKDDSPL KIKAQEFMNE LKDEN