Gene CPF_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1215 
Symbol 
ID4201683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1380017 
End bp1380388 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content26% 
IMG OID638082096 
ProductTPR domain-containing protein 
Protein accessionYP_695661 
Protein GI110798630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000931471 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTA TAATTTCAAA GTGTTTAATA GATGATTTAA TAGAACAAAT TGAGTTTATA 
ATGAAAAAGG TAGAGGGATT AAAAGAGAGT ACCTATATAA AAGAATCTCT AAAGAAAGCA
AGAAAGTATA TTTGCTCTAG AGAATATGAT AAGGCTGAAT TATTATTAAA AAATGCTTTA
ATAATTAATA GTAGTTCAGC AGAAATAGAA AACTTACTTG GAGTAATTGA AGAAAAAAGA
GGAAATGTTT TGTTAGCACA AAGATATTAT AGGGCAGCAT TAGCCTTTGA ACCTTGTTAT
TTACCTGCTG ATAACAATTT AAAGAGAACT GTTTTTTATA ATAGTGGTAT ATCAAAATTT
GATTTGGGAT AA
 
Protein sequence
MSIIISKCLI DDLIEQIEFI MKKVEGLKES TYIKESLKKA RKYICSREYD KAELLLKNAL 
IINSSSAEIE NLLGVIEEKR GNVLLAQRYY RAALAFEPCY LPADNNLKRT VFYNSGISKF
DLG