Gene CPF_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1193 
Symbol 
ID4201568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1358614 
End bp1359534 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content28% 
IMG OID638082074 
Productbacitracin ABC transporter, ATP-binding protein 
Protein accessionYP_695639 
Protein GI110801261 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00148533 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGAAATA TAATTTCTAT AAGAAATTTA AACAAAAATT ATGGTAAGAA AAATATTATT 
GATAATTTAA GTATGAATCT AAAAAAAGGC GATATATATG GTTTAGTTGG GAAAAATGGT
GCTGGTAAAA CAACTTTAAT AAGAATTATT TTATCCTTAG CTAACTATGA CTCAGGAGAA
ATAGAACTTT TTGGTGAAAT TGATGAAAAG AAAAAGCTTT ATGAGCATAA GAAAATAGGC
AATATAATAG AAACTCCATC ATTTTATTCT TTTCTTACAG CAAAGCAAAA TCTTGAATAT
TATAGAATTC AAAGAGGAAT AGTAGGAGAA AAATCTATTG ATGAAATCTT AGAAATGGTT
GGACTTGGAG ATGTGGGAAA TAAAAAGTTC AAAAAGTTTT CACTAGGTAT GAAGCAAAGA
TTAGGATTAG CCTTGGCACT TTTAGGAGAA CCAGAATTAC TTATTTTAGA TGAGCCTACT
AATGGAATGG ATCCTATGGG AATTAAAGAA GTAAGAGAAG TATTAATTAA TTTAAATAAG
AAAAATGGAG TTACAATATT AGTATCAAGT CATATTTTAG GAGAGTTATC ACAACTTGCA
AATTGTTATG GCTTTTTAAA GGATGGGAAA ATAATAGAAG AGATTTCATC AGAGGAACTT
AATGAGAAAT GTAGGAATCA TTTGCTTATT AAAGTTGACG ATTGTAAAAA GGCTGCAGTA
ATATTGGAAA AGGTTTTAGA TAATAACTCA TATGAAGTTT TACCTGATAG ATTTATTAAG
ATTTATAATA AGTTAGATGA ACCTCAATTA ATAAACAGAG CGTTAGTAGA AAGTGGAGTT
GAAGTTTATT CTTTAGAAAG AGTAGGAGTT AATTTAGAAG ATTACTTTGT AGATTTAATT
GGAGGTGAAT ATAATGCTTA A
 
Protein sequence
MGNIISIRNL NKNYGKKNII DNLSMNLKKG DIYGLVGKNG AGKTTLIRII LSLANYDSGE 
IELFGEIDEK KKLYEHKKIG NIIETPSFYS FLTAKQNLEY YRIQRGIVGE KSIDEILEMV
GLGDVGNKKF KKFSLGMKQR LGLALALLGE PELLILDEPT NGMDPMGIKE VREVLINLNK
KNGVTILVSS HILGELSQLA NCYGFLKDGK IIEEISSEEL NEKCRNHLLI KVDDCKKAAV
ILEKVLDNNS YEVLPDRFIK IYNKLDEPQL INRALVESGV EVYSLERVGV NLEDYFVDLI
GGEYNA