Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1193 |
Symbol | |
ID | 4201568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1358614 |
End bp | 1359534 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638082074 |
Product | bacitracin ABC transporter, ATP-binding protein |
Protein accession | YP_695639 |
Protein GI | 110801261 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00148533 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGAAATA TAATTTCTAT AAGAAATTTA AACAAAAATT ATGGTAAGAA AAATATTATT GATAATTTAA GTATGAATCT AAAAAAAGGC GATATATATG GTTTAGTTGG GAAAAATGGT GCTGGTAAAA CAACTTTAAT AAGAATTATT TTATCCTTAG CTAACTATGA CTCAGGAGAA ATAGAACTTT TTGGTGAAAT TGATGAAAAG AAAAAGCTTT ATGAGCATAA GAAAATAGGC AATATAATAG AAACTCCATC ATTTTATTCT TTTCTTACAG CAAAGCAAAA TCTTGAATAT TATAGAATTC AAAGAGGAAT AGTAGGAGAA AAATCTATTG ATGAAATCTT AGAAATGGTT GGACTTGGAG ATGTGGGAAA TAAAAAGTTC AAAAAGTTTT CACTAGGTAT GAAGCAAAGA TTAGGATTAG CCTTGGCACT TTTAGGAGAA CCAGAATTAC TTATTTTAGA TGAGCCTACT AATGGAATGG ATCCTATGGG AATTAAAGAA GTAAGAGAAG TATTAATTAA TTTAAATAAG AAAAATGGAG TTACAATATT AGTATCAAGT CATATTTTAG GAGAGTTATC ACAACTTGCA AATTGTTATG GCTTTTTAAA GGATGGGAAA ATAATAGAAG AGATTTCATC AGAGGAACTT AATGAGAAAT GTAGGAATCA TTTGCTTATT AAAGTTGACG ATTGTAAAAA GGCTGCAGTA ATATTGGAAA AGGTTTTAGA TAATAACTCA TATGAAGTTT TACCTGATAG ATTTATTAAG ATTTATAATA AGTTAGATGA ACCTCAATTA ATAAACAGAG CGTTAGTAGA AAGTGGAGTT GAAGTTTATT CTTTAGAAAG AGTAGGAGTT AATTTAGAAG ATTACTTTGT AGATTTAATT GGAGGTGAAT ATAATGCTTA A
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Protein sequence | MGNIISIRNL NKNYGKKNII DNLSMNLKKG DIYGLVGKNG AGKTTLIRII LSLANYDSGE IELFGEIDEK KKLYEHKKIG NIIETPSFYS FLTAKQNLEY YRIQRGIVGE KSIDEILEMV GLGDVGNKKF KKFSLGMKQR LGLALALLGE PELLILDEPT NGMDPMGIKE VREVLINLNK KNGVTILVSS HILGELSQLA NCYGFLKDGK IIEEISSEEL NEKCRNHLLI KVDDCKKAAV ILEKVLDNNS YEVLPDRFIK IYNKLDEPQL INRALVESGV EVYSLERVGV NLEDYFVDLI GGEYNA
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