Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1143 |
Symbol | |
ID | 4203761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1304725 |
End bp | 1306764 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638082024 |
Product | hypothetical protein |
Protein accession | YP_695589 |
Protein GI | 110799978 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5337] Spore coat assembly protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.513503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAAATG AAAAGGCAAG TAAATATATT TCTCTAATAA GTATTTCCTT AGCTGTCATA TTTGTTTTTG TATCCGTATT TGCTTTAAAG TCATTTAATT CTACAGAAGC ACTTAGTACT AGTGGACAAT CTTCTACTAT TGATACGGTT TTAAATAAAA ATATTGTAAC TGATATAGAT ATAAAGATAA AAGAAAGTGA TTGGGAATGG TTAATTGAAA ATGCTACAGA TGAGGAATAT AGAAGTGCAG ATATAACTAT AAATGGAGAA ACTTTTTATA ATGTTGGGGT TAGACCTAAA GGAAATTCAA GTTTATCCTC TGTTGCAAAT GATGATACAA CAGATAGATA TAGTTTAAAA ATAGATTTTG GACAATATGT TGACGGACAG ACCTATCATG GAATAAGAAA ACTAGCTTTA AATAATAATA TATCTGATGC CACTTATATG AAGGAAGCAA TATCTTATGA CATATATAAT TTTCTTGGGA TTCCTACTCC AGAGTATTCT TATTCAAACA TAAAGATTAA TGGAGAACAG TGGGGATTAT ATTTAGCATT AGAAGTAATT GAGGAGAGAT TTGTTGAAAA AAATTATGGT GAATTAGAAG GTAATTTATA TAAACCTGAA ACTATGGGAG TAGGGGCAAA AAAAGATGAA GGAAATAAAG ATGCCATGCC TGATATGAAA AATAATCAAG GAAGAGAAGG GGGAATGATG AATCCACCTA ATATGCCTAA CAATGAAGGA AATAATAAAG AGGGTAATAA ACCTATGAAT ATTCCTAATG AAAATCAAAA TATGGCTGGC AATATGAATA AAGAAAATGC AGGAATGGGA CAAATGTCTC CTATGATGGG AGGAAAAAAT AATGAAGGTG CTGATTTTAA ATATATAGAT GATAATATTA GCAGTTATTC TACTTTAAGA GATAGTGCAG TATTTAAGAG TACAACGGAT GAAGATTTTG AAAATGTAAT TGAAATGATG AAAAGTTTAG AAAATGGTAG GGATATAGAG AAATATTTAA ATGTTGATGA AGTTCTTAAG TACTTTGCAG TAAACACTTT CTTAGTTAAC CTAGATAGTT ATTCAGGTGG AATGTATCAT AATTATTATC TTTACGAAAA TAATGGAGTT TGTGAGATAC TTCCATGGGA CTTAAATTTA TCCTTTGGAG GATTTGCCAC AAATAGTGGA AGTAGAGCTG TAAATTTCCC TATTGATTCT CCTGTTACAG GTAATTTAGA AAATTTCCCT CTTATAGGAA AACTTTTAGA AAATGATGAA TATAAAGAGA AGTATCATGA GTATTTAGAT AAGATAGTAA ATGAATATTT TAAAAGTGGT ATTTTTAGTA CTACAGTTAC CAATAATGAT AAGTTAATAG GAGATTACGT AAAGATTGAT CCTACAGCAT TCTATACTTA TGATGAATAC AAAAATGCCA TTAAGGAGTT ATTAGTTTTT GGAGAGGATA GAACAAAGAG TGTAGAAGCT CAGTTAAATG GAGAGCAAAC ATCAACGGAA TATGGAAACA TTGAAACTTC ATTAAATTTA AAAGCCTTAG GTGAACAAAA TATGGGTGGA AAAATGCCTA ATGATAAGAT GAATGAAGAA AACTCAGTAA ATAATAATGA AGAAAATAAT AATGGACAAG CTATTCCAGA AGGTGGAAGA CCTTTTAATG GAGGAAACAT GGGAGAAGCT CCTAATAATA TTAATAATCC TAATGGTAAT ATGGATAATA AAATACCTAA TATGGGAAAC ATGCCTACAC AAGAAAATAT ACAAGAGGCT ATGAAGATAT TGAATAACAG GGATTATTCA AGCTTAAGCG AAGAGGAAAA GAGACAATTA AATGATTTAG GAATAAGTGA AGAAAATATA AATATGTTTA ATAATATTCC TAAACAAGGA GAAAGAGGAG AAGTTAGAGA AACCTTTAAT AAAACATATT ATGTAATATT TGGAGGAGTT ATCCTAACAC TATTAATTTC CCTAGTTTTT GTAACAAAGT ATAAAAGAAA AAGATACTAA
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Protein sequence | MINEKASKYI SLISISLAVI FVFVSVFALK SFNSTEALST SGQSSTIDTV LNKNIVTDID IKIKESDWEW LIENATDEEY RSADITINGE TFYNVGVRPK GNSSLSSVAN DDTTDRYSLK IDFGQYVDGQ TYHGIRKLAL NNNISDATYM KEAISYDIYN FLGIPTPEYS YSNIKINGEQ WGLYLALEVI EERFVEKNYG ELEGNLYKPE TMGVGAKKDE GNKDAMPDMK NNQGREGGMM NPPNMPNNEG NNKEGNKPMN IPNENQNMAG NMNKENAGMG QMSPMMGGKN NEGADFKYID DNISSYSTLR DSAVFKSTTD EDFENVIEMM KSLENGRDIE KYLNVDEVLK YFAVNTFLVN LDSYSGGMYH NYYLYENNGV CEILPWDLNL SFGGFATNSG SRAVNFPIDS PVTGNLENFP LIGKLLENDE YKEKYHEYLD KIVNEYFKSG IFSTTVTNND KLIGDYVKID PTAFYTYDEY KNAIKELLVF GEDRTKSVEA QLNGEQTSTE YGNIETSLNL KALGEQNMGG KMPNDKMNEE NSVNNNEENN NGQAIPEGGR PFNGGNMGEA PNNINNPNGN MDNKIPNMGN MPTQENIQEA MKILNNRDYS SLSEEEKRQL NDLGISEENI NMFNNIPKQG ERGEVRETFN KTYYVIFGGV ILTLLISLVF VTKYKRKRY
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