| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1139 |
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| Symbol | |
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| ID | 4203051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1300967 |
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| End bp | 1301650 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638082020 |
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| Product | DNA-binding response regulator |
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| Protein accession | YP_695585 |
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| Protein GI | 110799121 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.034136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAAAG TACTACTTGT TGAAGATAAT ATAGAGATTA GTGAAAATAT AGTTGAGTAT
TTTAAAAATG ATGTGGAGAT AGAATGCGTT TATGATGGAT TAGATGCTAT AGAATATTTA
AATACATATT ATTTTGATAT AGTTATATTA GATTTGATGC TGCCAGGCGC TGGAGGTATG
GAGGTATTAA ACTTTATTTC AAAGAAGAGG CTAAATACAG GAGTTATAGT TCTAACTGCA
AAAGAAGAGC TTGGAGATAA GCTTAGAGCC TTTAATTTAG GAGCTAATGA TTATTTAACT
AAACCTTTTT TTATGGAAGA ATTAAAAGCA AGGGTAAATG TTATACTTAA AAGCTTAGGA
AAGATAAAAG ATTCAAACAT ACTCCAGTTT AAGAGTATGG AAATAAACAT GAAGACAAAG
AAGGTTTTTA TAAATCATAA AGAATTAGAA TTAAATGAGA AATTATTTAA TCTATTAGAA
TATTTAGTAA TAAATAAGGG AGTTGTACTT TTTAAAGAGC AACTTTTTGA TAATATATGT
GGATATAACA GTGATGCATC TACAGAAATT ATAGAAGTTT ATATGAGTAG ACTTAGAAAA
CAATTAAGTC CCTTTGGATA TGATAAATAT ATAGTTACTA AAAGAGGAAT GGGATATTTA
ATAGATGAGA GCATAGAGGA TTAG
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| Protein sequence | MIKVLLVEDN IEISENIVEY FKNDVEIECV YDGLDAIEYL NTYYFDIVIL DLMLPGAGGM
EVLNFISKKR LNTGVIVLTA KEELGDKLRA FNLGANDYLT KPFFMEELKA RVNVILKSLG
KIKDSNILQF KSMEINMKTK KVFINHKELE LNEKLFNLLE YLVINKGVVL FKEQLFDNIC
GYNSDASTEI IEVYMSRLRK QLSPFGYDKY IVTKRGMGYL IDESIED
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