Gene CPF_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1025 
Symbol 
ID4202067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1176353 
End bp1177627 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content28% 
IMG OID638081906 
Productacetyltransferase 
Protein accessionYP_695471 
Protein GI110799514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0337333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGAAAG AGTATTTAAA AGCAGATGAA AAGGATTATG AGGAGTTAGT TGACTTTATA 
AATTATGTAT TTAGTCATTC AGGTGAAAGC ACTGATTTTC CAGTCTTATT GCCTAAACTA
TATAAGAATA AGGATAAAAT TAAGTACCAT CATATAATAA AAGTAGATAA CAGGATAAAG
GGCGTAGTAG GGGCTTTTCC ATTAACCTTA AGCTTATTAG ATGAAAAAGT AAATGTTGTA
GGAATTGGAA GCGTATCAGC TCATCCCTAT TCAAAGGGAC AAGGCTATAT GAAAGAACTT
ATGAATAAAG CTATTTGTGA GATGAAAAAT GAGAATGTGG ATATGAGTGT TCTTAATGGG
TATAGACAGA GGTATGAACA CTTTGGATAT GAGCCTTGTG GACAACATAT AAACTTTAAT
ATTCTACATG TAAATATAAA CTATAAGCGT GATGAATTAA TTAATAAGGG AATAAGCATT
CATTTATTAG ATGAAAATGA TCCTAATATA GTAGAAAAGG CATACAAACT TCATTGTAAG
AAAAATGTAA AGATAGAAAG AAAAAAAGAA GAATTCTTAG ATATATTAAA ATCATGGAAT
TGCAGAATTT ACTCTGTGTT TAAAAATGGC GAATTTATTG GATATATTTC CTCAAATAAT
GGGTTTATTG AAGAAATAGT TATAGAGAAT AACAATGATT TAAATTTTGT CATAGCTTCA
TACATAAAAA CATTTAATCA TAGGGAAGTA AATGTAAGAG TTCCAATCTA TGAAAGAGAG
AAAATATCAG AGTTTTTAAA GATATGTGAA AATTACTCAA TTACTAAAAA TAATAATTTT
AGAATATTTA ACTATGAAAA GATAGTGAGA ATAATGCTAA AACTAAAATC CACTTACTCA
AATCTAGAAG ATGGGGAGTA TAACATAAAA ATAATAAACT ATGGAGTTTT AAAGATTAAA
GTTCATAAAA ACAATGTGGA AGTGAAAAAA GTTGAAGAGA AAACCTATAA AGCTAAAGGA
AATTTCAACA ATAGTGAAGA TGTAATTTAT GAAGAAAAGG AATATTTCCA TAGTAGTGGA
GAAGAAATCT ATAAAGATAA GGAAGCTTTA AATAGCAGTG AAGAGGAATT TCATATTGAA
TTAAATGAGC TAGAAGCAAT GGAATTTTTA TTTTCACCAA TAAAATCCTA CTTTAATTTC
AATAAAGATA CTCCAAGTTT TTTAAATAGC TGGCTACCAC TTCCATTATA CATAGACAAT
TTAGATTGTG TGTAA
 
Protein sequence
MGKEYLKADE KDYEELVDFI NYVFSHSGES TDFPVLLPKL YKNKDKIKYH HIIKVDNRIK 
GVVGAFPLTL SLLDEKVNVV GIGSVSAHPY SKGQGYMKEL MNKAICEMKN ENVDMSVLNG
YRQRYEHFGY EPCGQHINFN ILHVNINYKR DELINKGISI HLLDENDPNI VEKAYKLHCK
KNVKIERKKE EFLDILKSWN CRIYSVFKNG EFIGYISSNN GFIEEIVIEN NNDLNFVIAS
YIKTFNHREV NVRVPIYERE KISEFLKICE NYSITKNNNF RIFNYEKIVR IMLKLKSTYS
NLEDGEYNIK IINYGVLKIK VHKNNVEVKK VEEKTYKAKG NFNNSEDVIY EEKEYFHSSG
EEIYKDKEAL NSSEEEFHIE LNELEAMEFL FSPIKSYFNF NKDTPSFLNS WLPLPLYIDN
LDCV