| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1008 |
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| Symbol | |
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| ID | 4201815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1158231 |
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| End bp | 1159394 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 638081889 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_695454 |
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| Protein GI | 110800383 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0937506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAGAG CATACAAGAT AGAGATTAAT CCTACTGATG AACAAAAGTG TAAAATACAT
CGAACTATTG GTGTATCAAG ATTTGTGTAT AACTTTTATA TTGCTCGTAA TAAAGAAGTT
TATGAGAAAG AAGGAAAGTT TGTAAGTGGC ATGGATTTTT CAAAATGGTT AAATAATGAA
TACATTCCTA ATAATCAAGA GATGAAATGG ATTAAAGAAG TATCTTCAAA AGCTACTAAA
CAAGCTATTA TGAATGCAGA TAAAGCTTTT AGAGATTTCT TTAAAAAATC TAAAGGTTTT
CCAAGATTTA AGAAAAAGAA GAATCAAGAT GTAAAAGCTT ATTTTCCTAA AAATAATAAG
ACTGATTGGA CTTTAGAAAG ACATAGAGTC AAAATACCAA CTTTAGGATG GGTAAGATTA
AAAGAATTTG GTTATATTCC TGTAAATTCA ATAGTTAAAA GTGGTACTAT AAGTCAAAAA
TCAGATAGAT ATTATGTATC TATATTAGTT GAAGAAGATG ATAAGAAAGT ATATAAATCT
ACTAATGAAG GTTTAGGTAT AGATTTAGGA GTAAAAGAAT TTGCTGTATG TAGTGATGGA
ATTAAGTTTA AAAATATAAA TAAAACATCT ACTGTTAAAA AAGTAGAAAA GAAGTTAAAA
AGAGAACAGA GAAAACTTTC AAGGAAATAT GAAAGTTTAA AAATAAGAAA TAAAAATATA
AAAGAAGGGA GAGCTACTGG TCAAAATATT CAAAAACAAG TAATCAAAGT ACAAAAACTT
CATCAGAGAT TAATAAATAT ACGAACTGAT TATATAAATA AAACAGTATT TTCAATTATA
AAGCAAAAAC CAAGCTATAT AACTATTGAA GATTTAAATA TTAAAGGAAT GATGAAAAAT
AAGCATTTAT CTAAAGCTAT TGCAAGTCAG AAGTTTTTTG AATTTAAAAC TAAGTTAACA
GTTAAATGTA AAGAAAATAA TATAGAACTT AGAATAGTGG ATAGATTTTA TCCATCATCA
AAGACTTGTA GTCAATGTGG AAAGATTAAG AAAGATTTAA AACTGTCAGA CAGAATTTAT
AAATGTGATT GTGGACTTAC TATTGATAGA GATTTAAACG CAAGTATTAA TCTTAAAAAT
GCTAAAGAAT ATAAGATAGC TTAA
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| Protein sequence | MKRAYKIEIN PTDEQKCKIH RTIGVSRFVY NFYIARNKEV YEKEGKFVSG MDFSKWLNNE
YIPNNQEMKW IKEVSSKATK QAIMNADKAF RDFFKKSKGF PRFKKKKNQD VKAYFPKNNK
TDWTLERHRV KIPTLGWVRL KEFGYIPVNS IVKSGTISQK SDRYYVSILV EEDDKKVYKS
TNEGLGIDLG VKEFAVCSDG IKFKNINKTS TVKKVEKKLK REQRKLSRKY ESLKIRNKNI
KEGRATGQNI QKQVIKVQKL HQRLINIRTD YINKTVFSII KQKPSYITIE DLNIKGMMKN
KHLSKAIASQ KFFEFKTKLT VKCKENNIEL RIVDRFYPSS KTCSQCGKIK KDLKLSDRIY
KCDCGLTIDR DLNASINLKN AKEYKIA
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