Gene CPF_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0979 
Symbol 
ID4201926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1129893 
End bp1130990 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content27% 
IMG OID638081861 
Producthypothetical protein 
Protein accessionYP_695426 
Protein GI110801325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00148121 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGAT GTGAATTGTT ATTAATTGTA GATGGGGACA CAATTGAAGT AGAAGCAAAA 
GTGACATTAG AAAAAGAAAT GAAGCTTAGT TTTGCATTAA AAGACTCTTT TAATATGTTA
TATTCTTCTG CTGAATATGA CACAGAACTT ATGGAACCTA ATTTTATTGG CAAGTGCAAT
AAATATATTT TAAAGGAAGA AACTGATAAT TTTACTTTAA GATACAGGGG AAAACCCTAT
GGATTTTGTA CTGAATGCAG TGATGAAAAA GTTTTATTAT CATTTTATTG TGCTTGGTAT
CCAATTTTAG ATGATTTTTT ATTTGATGAT ATTAAAGTAA TTATAAAAGG TTTAGAGAAT
TTTATAGTAT TAGATGCAGT AAAAGAAAAG GATTTCTGGA TATTTAATAA TAAAATACCC
TTTGATTGCA ATATAAGAGC CTTTAATAAG GATAAAGTAT TTTCCTCAGA ATGTGATTTC
ATAAAAATAT ATTCTGGAAA GGAAAGCGAA TTAGGATATA TAAATAAAAT AGTTGGAGAG
TTACATAAGA TAAATGAATA TTATAGCAGA ATATTAGGAG AAAAGGAAAA TAATAAGCTA
CAATTAATTT CTACTGGTAT AGAAAATAGT GGTGGATATT TTAGAGAGGG ATTTATTGTA
TTACCCTGCT TAGAGGATAA TGATAAGTTT ATATATTCAT TTTTAGGACA TGAATTGGCT
CATGCATGGC ATATGGGATA TTCTGTTACA ACATATGATG ATTGGCTTAA TGAAACTGGA
GCTGAATGGA GTAGTTTATC ATATATATTA AGTATTGGTA AGAATGATTT ATATAACAAA
CAAATTCAAT ATGCAATAAA AGCCTTTGAA GAATATCCTA TAATGAAACC CGAGGATGGG
TCAAGACCTA GAACAGCACA CTTTGGAGGA GTTTTGTTAT TTGATAAAAT TTACAAAAGG
TATGGGTTAG ATACAATAAA TAAGTTATTA AGGTTAGCCT ATGAAACAAC TCCTAAAAAT
ACTGATGAAT TTTTAAAAAG AGTAAAGGGT GATTTTGATA CTGAAATTTA TAATATATTA
AGTGAGCCTT TTAGATAA
 
Protein sequence
MNRCELLLIV DGDTIEVEAK VTLEKEMKLS FALKDSFNML YSSAEYDTEL MEPNFIGKCN 
KYILKEETDN FTLRYRGKPY GFCTECSDEK VLLSFYCAWY PILDDFLFDD IKVIIKGLEN
FIVLDAVKEK DFWIFNNKIP FDCNIRAFNK DKVFSSECDF IKIYSGKESE LGYINKIVGE
LHKINEYYSR ILGEKENNKL QLISTGIENS GGYFREGFIV LPCLEDNDKF IYSFLGHELA
HAWHMGYSVT TYDDWLNETG AEWSSLSYIL SIGKNDLYNK QIQYAIKAFE EYPIMKPEDG
SRPRTAHFGG VLLFDKIYKR YGLDTINKLL RLAYETTPKN TDEFLKRVKG DFDTEIYNIL
SEPFR