| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0910 |
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| Symbol | |
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| ID | 4202911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1073139 |
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| End bp | 1074983 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 638081792 |
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| Product | capsular polysaccharide biosynthesis protein |
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| Protein accession | YP_695359 |
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| Protein GI | 110799171 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.143929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGTG TACGTAAAAT AAAGTGTTTA TTTCTAATAT TCTTAGATAT TTTATTTATA
AATTTAGGGT ATTTCATAAG TTTATGTTTT GAATATGGAA AAGAAATGAA AATAGAGTAT
TTTTTTAATA TTAGAAATTT AATTATATTA GCAATTTTTA CGAATATATT GATATTTTGC
TTTTTTAATC TTTATAAAAA TATTTGGCAC ATGGCAGGGA TTAGCGAGTG TATAAGGTGT
TTAATAGCGT CTTCAATAAG TTCTATATTA TTAATATTAT ATAAATTTAT TTTTAATATG
GATGTAACAA TAGTATTTTT AATTAATAGT AGCATTTTAA TTTGTATGTT TTCATTACTT
ACACGTATGT CTATAAGAAT TTTTAGGAAA ATATATTTTC CTTATAAACT TGAATCCAAC
TTAAGAAAAA ATGTTCTTAT AGTTGGAGCT GGTCACTGTG GACGTATTGT TATAGATGAG
ATGAATAAAA ATAATAAATT TAATCCTATT GGTATAGTTG ATGATGATTT AAATAAAAAA
GGAACTTTTT TAAATGGTGT GAAGGTACTT GGAAATAGAG ATGATATAGA AAAAATATGT
AAAAGAATAA AAGTAGATAT TATTTTAATT GCGATTTCAA ATTTATCATC AAATGACAAG
GATGAAATTA TAAAAAGATG TGAAAATACA AAGATAAAAG TAAAAATAAT TCCAAGTATA
TATGATTTAA TTGATGGAAA TGTTAAATTA ACTAATATTA GAGACATTGA TTTAAGAGAT
TTATTAGGAA GAGATGAAAC TAGATTAGAC AAAGAGGAGG TAAATAATTA TATAAAAGAA
AAAATTGTTA TTGTAACTGG AGGAGGAGGT TCTATTGGTT CAGAACTTTG TAGGCAGATA
GCAGTGTTTA ATCCTAAAAA GCTTATTATA TTAGATATTT ATGAAAATTA TGCTTATGAA
TTAGAAAATG AATTAAAAAG AAATTTTAAA AATTTAGATT TAGAAGTTAT TATAGCTTCT
ATAAGAGACA AATCTAGATT AAAGAAAATA TTTGATAAGT ATAAACCAGA TTTAATATTT
CATGCGGCAG CCCATAAGCA TGTACCTTTG ATGGAAAATA ATCCAGAAGA AGCTATAAAA
AATAATGTTT TAGGAACTTT AAATGTAGCA GAATGTGCTG ATGAATTTAA TTTAGAGAAG
TTTGTATTTA TATCTACTGA TAAGGCAGTT AATCCAACTA ATATAATGGG GGCAACTAAA
AGAATTGGTG AGATGATAAT ACAAGCTATG AATGAAGTTA GTAAAACAGA TTTTGTTGCA
GTAAGATTTG GAAATGTATT AGGAAGTAAT GGTTCAGTTA TTCCACTATT TATAGAACAA
ATAAAAAATG GAGGACCTGT TACTTTAACT CATAAGGATA TAACAAGATA TTTTATGTTA
ATTCCAGAAG CAGCACAACT TGTACTTCAG GCAGGAGCTT ATGCAAAAGG TGGAGAAATT
TTTGTTCTTG ATATGGGAAA ACCAGTAAAA ATTTATGATT TAACAGAAAA ATTAATAAGA
TTATCAGGGT TTGAACCGAA TAAAGATATA CAAATAAAGA TTGTGGGACT TAGACCAGGA
GAAAAGCTTT ATGAGGAACT TATTTTAAGT GAAGAAGAGC TTAAAAAGAC TAAGAATGAA
AAAATATTTA TATTAAGTCC ATTTAAGTTT GATATTAAAG AGATTAAAAA GAAAATAGTA
GAACTTTTAA ATGTAGCTTT AAATGAAGAT AAAAAAGCCA TTAAAGAGAA GCTTAAAGAA
ATTGTGAAAA ATTATAGAGA TTTAGAGCAA ATAGATTTTA TATAA
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| Protein sequence | MNSVRKIKCL FLIFLDILFI NLGYFISLCF EYGKEMKIEY FFNIRNLIIL AIFTNILIFC
FFNLYKNIWH MAGISECIRC LIASSISSIL LILYKFIFNM DVTIVFLINS SILICMFSLL
TRMSIRIFRK IYFPYKLESN LRKNVLIVGA GHCGRIVIDE MNKNNKFNPI GIVDDDLNKK
GTFLNGVKVL GNRDDIEKIC KRIKVDIILI AISNLSSNDK DEIIKRCENT KIKVKIIPSI
YDLIDGNVKL TNIRDIDLRD LLGRDETRLD KEEVNNYIKE KIVIVTGGGG SIGSELCRQI
AVFNPKKLII LDIYENYAYE LENELKRNFK NLDLEVIIAS IRDKSRLKKI FDKYKPDLIF
HAAAHKHVPL MENNPEEAIK NNVLGTLNVA ECADEFNLEK FVFISTDKAV NPTNIMGATK
RIGEMIIQAM NEVSKTDFVA VRFGNVLGSN GSVIPLFIEQ IKNGGPVTLT HKDITRYFML
IPEAAQLVLQ AGAYAKGGEI FVLDMGKPVK IYDLTEKLIR LSGFEPNKDI QIKIVGLRPG
EKLYEELILS EEELKKTKNE KIFILSPFKF DIKEIKKKIV ELLNVALNED KKAIKEKLKE
IVKNYRDLEQ IDFI
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