Gene CPF_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0894 
Symbol 
ID4203778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1059860 
End bp1060624 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content30% 
IMG OID638081776 
Productethanolamine utilization protein 
Protein accessionYP_695343 
Protein GI110800071 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAG CTTTAGGATT AATAGAATTT ATAGGATATG TACCAGCCAT ATGTGCTGCA 
GATACAGCCT TAAAAGCTGC AAGTGTTGAT TTGATTGGAA TAGAAAAGGT TACTGGAGGA
ATTGTAACTG TAAAGATTAC AGGAGATGTA GATGCTGTAC AAGCTGCAGT GGAATCTGCT
GAAAATTATG CAAGTAGAAT TGGAAGTTTA AGAAGTGCTC ATGTAATTCC AAGACTTGAT
GATGAGGTAG AGAATCTTTT AATGAATAGT AAAAGTTCAG AAGAAGAGAT ACAAGAAGAA
ATTCAAGAGT TGGAAGAAGA TATTAAAGAG GTTTTTGAAG AGATAAGAGA GGAAATTACA
GAAGCTATTA TAGAGGAAAC AGAATCTAAA GAAGAAAGCC TACAAGAAGA TGTTGTTGAA
TATGTTAAAA ATATTAATGA TGAAGTAGAA GAAATTTCTG AAAAAATAGA AGGTGAATCT
CACTTAGATG AAATAGAAGT TTTTGAAATC TCTCAAAATA AAGAAAGCTC AAAAGAATCT
TTAGAAGAAG TTATTATAAA ACCTGAACTG ACAGAGGATA AGACCACAGA GAATAAAGAA
GCTGATTCTA TAGATATAAA AGAAATATCT AAAATGAGTG TTAAGGAATT AAGAAAGAAA
ATAAAATCCT TAAATATTAA TATAACTTCT AATAAGCTTA AGTCTCTAAA GAAGAAAGAT
TTAGTAGATA TATTACTAAA ATATAATGAA GAAGGTGACA GTTAA
 
Protein sequence
MGKALGLIEF IGYVPAICAA DTALKAASVD LIGIEKVTGG IVTVKITGDV DAVQAAVESA 
ENYASRIGSL RSAHVIPRLD DEVENLLMNS KSSEEEIQEE IQELEEDIKE VFEEIREEIT
EAIIEETESK EESLQEDVVE YVKNINDEVE EISEKIEGES HLDEIEVFEI SQNKESSKES
LEEVIIKPEL TEDKTTENKE ADSIDIKEIS KMSVKELRKK IKSLNINITS NKLKSLKKKD
LVDILLKYNE EGDS