Gene CPF_0800 details

Gene Information

• Locus tag: CPF_0800
• ID: 4202737
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 947972
• End bp: 948685
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 638081684
• Product: hypothetical protein
• Protein accession: YP_695251
• Protein GI: 110798610
• COG category: [R] General function prediction only
• COG ID: [COG1451] Predicted metal-dependent hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0356506
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATATTAA AATTTCAATA TGAAAATAAA ATTATAGATT TTGAATTAAT ATTAAGTAAA 
AGAAAAACTA TGAGTATAGA GATTTCAGCT GAGGGAGAAG TAAAAGTAAG AGCCCCTATG 
GGCATTTCAG AGGATGTAAT TATTAGTCAG GTTAGGGAAA AAGGAAAGTG GATTCTTGAA 
AAGAGAGAAG AGGCTTATAA GCGTAATTCT AAAAAGGTTG AAAAAAACTA TAAAGATGGA 
GATTTATTTA TGTATTTAGG AAATAAATAT TCATTAAAAA TAAAGTTTAG TCCATTTTTA 
AAGAGGATTT CTGTTAGGAT AATAGGAAAA GAATTAGTGG TTTGTATGAC AGAATATAAT 
AAGGAAAGAT TAAGAAAAGC AATTGAATTA TGGTATAGGG AGGAAGGGTT AAGAATAATT 
AAAGATAGAG TTAATCATTA TTTGAAGTTT TATCCTGTAA AGCCTAGAAG CATAAAGGTT 
AAAGAGCAAA AAAGAAGATG GGGTAGCTGT ACATATTATA ATGATTTACT TTTTAATTGG 
AGATGCATCA TGGCACCTTT AAAAGTAGTT GATTATATAG TTGTTCATGA AATGACACAT 
ATGGTTCATA AGGATCATTC AAAAAATTAT TGGAATTTTG TTTCAAAAAT TATTTCAAAT 
TATAAAGAAC AAAAAATGTG GTTAAAAGAA AATGGAATTA TAATGGATAT ATGA 

 

Protein sequence

MILKFQYENK IIDFELILSK RKTMSIEISA EGEVKVRAPM GISEDVIISQ VREKGKWILE 
KREEAYKRNS KKVEKNYKDG DLFMYLGNKY SLKIKFSPFL KRISVRIIGK ELVVCMTEYN 
KERLRKAIEL WYREEGLRII KDRVNHYLKF YPVKPRSIKV KEQKRRWGSC TYYNDLLFNW 
RCIMAPLKVV DYIVVHEMTH MVHKDHSKNY WNFVSKIISN YKEQKMWLKE NGIIMDI