| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0772 |
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| Symbol | |
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| ID | 4201298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 920024 |
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| End bp | 920863 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638081656 |
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| Product | sortase family protein |
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| Protein accession | YP_695223 |
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| Protein GI | 110799042 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00805513 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAGGCG TTAAGAAGAT TTATATTGTT TTAATATTTA TACTTGGATT AAGCATAGCT
TTTTATCCAT TGATAAGTGA TCAATGGAAT AAATATAGGG CTAATAAATT AATTGCTAAT
TATGATAATG TTGTTAAAGA AATAAAACCT GATGAAATTA AAAAGAAAAT AGATGATGCT
AGAAAGTACA ATGAAACATT AATTGGTGGG GTTGTACCAG ATGCTTTTTC CGTTAGAAAT
GGTGTTAAAG ATAAGGAGTA TGAATCATTA CTAAATATAA ATAATGATGG AATAATTGGA
AGTGTTGAAA TCCCATCAAT TGATGTTAAC ATACCAATTT ATCATTATAC TACAGATGAA
GTATTGGCTA AGGGGGCTGG TCATCTTTTT GGTAGTTCGT TACCTGTAGG TGGAGAGAGC
TCACATACTG TTATTTCAGC TCATAGGGGA TTGCCAAGTG CTAAGTTATT TACTGATTTA
GATCAACTTA AAGAAGGAGA TTTATTCTAT TTTCATGTAT GTGGTGAAAT TTTTGCATAT
AAAGTAGATC AAATATTAGT TGTTGAACCA GAGCAAACTT CTGAATTAGC AATTAAGGAA
GGTGAAGATT TGGCTACTTT ATTTACATGT ACACCGTACT CAATTAACTC ACATAGATTA
TTAGTTCGTG GTCATAGAGT TCCATACGAT AAAAAAGAAG AAATTCAAGA GAAAGAAAAA
GTAAAAAATG TACAACCGTA TTTCTTAATA GTAGAAATTG CATGTATTAT TGGAGGAATA
TTATTAGCTT TAATTTTAGT TAAATTACTT GACTTTATTA AAAAAAGACG AAAAGAGTGA
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| Protein sequence | MKGVKKIYIV LIFILGLSIA FYPLISDQWN KYRANKLIAN YDNVVKEIKP DEIKKKIDDA
RKYNETLIGG VVPDAFSVRN GVKDKEYESL LNINNDGIIG SVEIPSIDVN IPIYHYTTDE
VLAKGAGHLF GSSLPVGGES SHTVISAHRG LPSAKLFTDL DQLKEGDLFY FHVCGEIFAY
KVDQILVVEP EQTSELAIKE GEDLATLFTC TPYSINSHRL LVRGHRVPYD KKEEIQEKEK
VKNVQPYFLI VEIACIIGGI LLALILVKLL DFIKKRRKE
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