Gene CPF_0568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0568 
Symbol 
ID4202525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp676728 
End bp677828 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content26% 
IMG OID638081450 
Producthypothetical protein 
Protein accessionYP_695022 
Protein GI110800682 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATAATT TTTTTAGAAA CAATAAATCA TATATAAAAA TGGTATTAGT AATAATAGTA 
TCTTATCTAT CAATAAAGTT AATAGATAAT ATTCCTAGTG TTATGTCTGC TATTCATACA
ATTTTAGCAG TACTATTACC TTTTTTATTA GCATTTATTA TTGCCTATAT ATTAAATCCA
ATTGTAAATT TATTTAGCAA AAAATTTAAA TTATCAAGAG GAATTAGTAT AGTAATAACT
TACTTAATAT TTGTAACATC AATTTCACTA GCAGCAACTT ATTTATTACC TAAATTATAT
ACAAGTTTAA TTGAGTTAAT AGATAATATA CCTGCATTTA CTAATTATGT ACAAAACTTA
TTTACAGAAA TAATGGCAAG CTTTAAAGTT CCTGAAGGAA TAAACTCTTA TTTACCTTAT
GGAGATACTA ATAAACTAAT AACATTTATT GGTTCTATGG TTACAGTGTT ATCAAACTGG
TTACTAGATG CTGCCATAAG CTTAACTAGT TCTATAATAA ACTGGATATT TGGATTCTTA
ATTTCCATAT ATGTTTTAGT AGATAAAGAT AAATTCTTAG CTCATAGTAG TAAGGTTACA
AGAATCGTTT TTGGTAAAAA TCTTGGAAAC GAAATATTAG AATTTGTAAA GATACTTAAT
GAAAAAATAG GAACTTATGT TGGAATAAAA GCAATAGATT CCTTAATAAT AGGTGTACTG
GCCTTTATTG GATTAACAAT AATGAAATCT GAGTATGCAC TTTTATTATC AGTAGTAGTT
GGTATAACTA ATATGATTCC TTACTTTGGA CCATTTATAG GTATGGTTGT AGGATTCTTT
ATAAATGTAT TTATAAGCCC AATGAAAGCA GTTATTGTTT TAATATATCT TTTCATATTA
CAACAATTTG ATGCTTGGTA CTTAGATCCA AAACTTATAG GAAACAGAGT TGGTCTTAGC
CCATTTTTAG TAATCCTTGG AGTTACCCTT GGAGGAGCTA TCTATGGTCC TATAGGTATG
ATACTTGGAA GTCCAGTTAT GTCAGTTATT AGAATCTATA CTTTAAAATT AATTAAAAAA
TTTGAATATA GAGCAGAATA A
 
Protein sequence
MNNFFRNNKS YIKMVLVIIV SYLSIKLIDN IPSVMSAIHT ILAVLLPFLL AFIIAYILNP 
IVNLFSKKFK LSRGISIVIT YLIFVTSISL AATYLLPKLY TSLIELIDNI PAFTNYVQNL
FTEIMASFKV PEGINSYLPY GDTNKLITFI GSMVTVLSNW LLDAAISLTS SIINWIFGFL
ISIYVLVDKD KFLAHSSKVT RIVFGKNLGN EILEFVKILN EKIGTYVGIK AIDSLIIGVL
AFIGLTIMKS EYALLLSVVV GITNMIPYFG PFIGMVVGFF INVFISPMKA VIVLIYLFIL
QQFDAWYLDP KLIGNRVGLS PFLVILGVTL GGAIYGPIGM ILGSPVMSVI RIYTLKLIKK
FEYRAE