Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0568 |
Symbol | |
ID | 4202525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 676728 |
End bp | 677828 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 638081450 |
Product | hypothetical protein |
Protein accession | YP_695022 |
Protein GI | 110800682 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATAATT TTTTTAGAAA CAATAAATCA TATATAAAAA TGGTATTAGT AATAATAGTA TCTTATCTAT CAATAAAGTT AATAGATAAT ATTCCTAGTG TTATGTCTGC TATTCATACA ATTTTAGCAG TACTATTACC TTTTTTATTA GCATTTATTA TTGCCTATAT ATTAAATCCA ATTGTAAATT TATTTAGCAA AAAATTTAAA TTATCAAGAG GAATTAGTAT AGTAATAACT TACTTAATAT TTGTAACATC AATTTCACTA GCAGCAACTT ATTTATTACC TAAATTATAT ACAAGTTTAA TTGAGTTAAT AGATAATATA CCTGCATTTA CTAATTATGT ACAAAACTTA TTTACAGAAA TAATGGCAAG CTTTAAAGTT CCTGAAGGAA TAAACTCTTA TTTACCTTAT GGAGATACTA ATAAACTAAT AACATTTATT GGTTCTATGG TTACAGTGTT ATCAAACTGG TTACTAGATG CTGCCATAAG CTTAACTAGT TCTATAATAA ACTGGATATT TGGATTCTTA ATTTCCATAT ATGTTTTAGT AGATAAAGAT AAATTCTTAG CTCATAGTAG TAAGGTTACA AGAATCGTTT TTGGTAAAAA TCTTGGAAAC GAAATATTAG AATTTGTAAA GATACTTAAT GAAAAAATAG GAACTTATGT TGGAATAAAA GCAATAGATT CCTTAATAAT AGGTGTACTG GCCTTTATTG GATTAACAAT AATGAAATCT GAGTATGCAC TTTTATTATC AGTAGTAGTT GGTATAACTA ATATGATTCC TTACTTTGGA CCATTTATAG GTATGGTTGT AGGATTCTTT ATAAATGTAT TTATAAGCCC AATGAAAGCA GTTATTGTTT TAATATATCT TTTCATATTA CAACAATTTG ATGCTTGGTA CTTAGATCCA AAACTTATAG GAAACAGAGT TGGTCTTAGC CCATTTTTAG TAATCCTTGG AGTTACCCTT GGAGGAGCTA TCTATGGTCC TATAGGTATG ATACTTGGAA GTCCAGTTAT GTCAGTTATT AGAATCTATA CTTTAAAATT AATTAAAAAA TTTGAATATA GAGCAGAATA A
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Protein sequence | MNNFFRNNKS YIKMVLVIIV SYLSIKLIDN IPSVMSAIHT ILAVLLPFLL AFIIAYILNP IVNLFSKKFK LSRGISIVIT YLIFVTSISL AATYLLPKLY TSLIELIDNI PAFTNYVQNL FTEIMASFKV PEGINSYLPY GDTNKLITFI GSMVTVLSNW LLDAAISLTS SIINWIFGFL ISIYVLVDKD KFLAHSSKVT RIVFGKNLGN EILEFVKILN EKIGTYVGIK AIDSLIIGVL AFIGLTIMKS EYALLLSVVV GITNMIPYFG PFIGMVVGFF INVFISPMKA VIVLIYLFIL QQFDAWYLDP KLIGNRVGLS PFLVILGVTL GGAIYGPIGM ILGSPVMSVI RIYTLKLIKK FEYRAE
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